RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 ISCUQ9H1K1 167 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 SNX25Q9H3E2 840 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 LZTFL1Q9NQ48 299 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 TRIM10Q9UDY6 481 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 LAMA2P24043 3122 aaKnown RBP13.66□□□□□ -0.22
RUNX1-213ENST00000469087 COL4A6Q14031 1691 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 NT5C1B-RDH14C9J2C7 533 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 TMEM189-UBE2V1I3L0A0 370 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 CCP110O43303 1012 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 CYP1A1P04798 512 aaPredicted RBP13.66□□□□□ -0.22
RUNX1-213ENST00000469087 GALTP07902 379 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 VDRP11473 427 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 GZMAP12544 262 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 PAX3P23760 479 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 SLC11A1P49279 550 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 C10orf76Q5T2E6 689 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 SUSD3Q96L08 255 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 CWH43Q9H720 699 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 RC3H2Q9HBD1 1191 aaKnown RBP13.66□□□□□ -0.22
RUNX1-213ENST00000469087 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
RUNX1-213ENST00000469087 FAN1Q9Y2M0 1017 aa13.66□□□□□ -0.22
RUNX1-213ENST00000469087 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 ATP2C2O75185 946 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
RUNX1-213ENST00000469087 PBX3P40426 434 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 GALCP54803 685 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 CLEC16AQ2KHT3 1053 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 KIAA0319Q5VV43 1072 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 ZNF662Q6ZS27 426 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 PASD1Q8IV76 773 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 TMEM86AQ8N2M4 240 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 LRRC43Q8N309 656 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 WDTC1Q8N5D0 677 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 CPA5Q8WXQ8 436 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
RUNX1-213ENST00000469087 PDCL3Q9H2J4 239 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 KIAA1257Q9ULG3 409 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 PCDHGC3Q9UN70 934 aa13.65□□□□□ -0.22
RUNX1-213ENST00000469087 PTPRSQ13332 1948 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 PJA2O43164 708 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 RTN2O75298 545 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 TADA2AO75478 443 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 CYP11A1P05108 521 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 ODC1P11926 461 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 ACAT1P24752 427 aaKnown RBP13.64□□□□□ -0.23
RUNX1-213ENST00000469087 LHX1P48742 406 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 BCAR1P56945 870 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 KIF5AQ12840 1032 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 CNGA2Q16280 664 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 PPP1R26Q5T8A7 1209 aaPredicted RBP13.64□□□□□ -0.23
RUNX1-213ENST00000469087 ACAD10Q6JQN1 1059 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 TMEM175Q9BSA9 504 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 COLEC11Q9BWP8 271 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 GPR62Q9BZJ7 368 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 MARCH5Q9NX47 278 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 DDX43Q9NXZ2 648 aaKnown RBP13.64□□□□□ -0.23
RUNX1-213ENST00000469087 SALL4Q9UJQ4 1053 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 ADAM28Q9UKQ2 775 aa13.64□□□□□ -0.23
RUNX1-213ENST00000469087 O00370 1275 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 MED7O43513 233 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 H2AFZP0C0S5 128 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 NOMO3P69849 1222 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 ARHGAP29Q52LW3 1261 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 SGO2Q562F6 1265 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 NAA35Q5VZE5 725 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 DENND1BQ6P3S1 775 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 NYAP1Q6ZVC0 841 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 H2AFVQ71UI9 128 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 TMEM173Q86WV6 379 aaPredicted RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 RTP3Q9BQQ7 232 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 LUC7LQ9NQ29 371 aaKnown RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 FAM49BQ9NUQ9 324 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 GOLGA6L9A6NEM1 432 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 KRT86O43790 486 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 PTPN1P18031 435 aaKnown RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 ALDH7A1P49419 539 aaKnown RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 PSMC1P62191 440 aaKnown RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 CENPCQ03188 943 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 BTG3Q14201 252 aaPredicted RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 CCDC142Q17RM4 750 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 PSRC1Q6PGN9 363 aaPredicted RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 LCLAT1Q6UWP7 414 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 TRIM72Q6ZMU5 477 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 TNIP3Q96KP6 325 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 C16orf45Q96MC5 204 aaPredicted RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 THAP2Q9H0W7 228 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 LHX5Q9H2C1 402 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 RRAGDQ9NQL2 400 aaPredicted RBP13.63□□□□□ -0.23
RUNX1-213ENST00000469087 DSEQ9UL01 958 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 INTUQ9ULD6 942 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 PAXBP1Q9Y5B6 917 aa13.63□□□□□ -0.23
RUNX1-213ENST00000469087 ANKRD62A6NC57 917 aa13.62□□□□□ -0.23
RUNX1-213ENST00000469087 TRAPPC3O43617 180 aa13.62□□□□□ -0.23
RUNX1-213ENST00000469087 MICAL2O94851 1124 aa13.62□□□□□ -0.23
RUNX1-213ENST00000469087 GJB5O95377 273 aa13.62□□□□□ -0.23
RUNX1-213ENST00000469087 TYMPP19971 482 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms