RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 GTF3C4Q9UKN8 822 aa12.4□□□□□ -0.42
CDHR3-205ENST00000468143 A0A1W2PRU2 124 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 KRBA1A5PL33 1030 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 LRRIQ3A6PVS8 624 aaPredicted RBP12.39□□□□□ -0.43
CDHR3-205ENST00000468143 CALUO43852 315 aaPredicted RBP12.39□□□□□ -0.43
CDHR3-205ENST00000468143 ATP2C2O75185 946 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 PRPF40AO75400 957 aaKnown RBP12.39□□□□□ -0.43
CDHR3-205ENST00000468143 PDGFRBP09619 1106 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 HAPLN1P10915 354 aaPredicted RBP12.39□□□□□ -0.43
CDHR3-205ENST00000468143 SRFP11831 508 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 NPR3P17342 541 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 ATF6P18850 670 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 LMO2P25791 158 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TUFMP49411 452 aaKnown RBP12.39□□□□□ -0.43
CDHR3-205ENST00000468143 MYL6P60660 151 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 MYL7Q01449 175 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TSPY1Q01534 308 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 PLD1Q13393 1074 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 BIRC3Q13489 604 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TRPC3Q13507 836 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TEAD2Q15562 447 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 FAM78AQ5JUQ0 283 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 SDHAF4Q5VUM1 108 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TANGO2Q6ICL3 276 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 MTSS1LQ765P7 747 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TMC8Q8IU68 726 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TMEM86AQ8N2M4 240 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 STKLD1Q8NE28 680 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 ENGASEQ8NFI3 743 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 SHKBP1Q8TBC3 707 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 ACBD6Q9BR61 282 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 MRPL45Q9BRJ2 306 aaKnown RBP12.39□□□□□ -0.43
CDHR3-205ENST00000468143 PCDHB5Q9Y5E4 795 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 TECTAO75443 2155 aa12.39□□□□□ -0.43
CDHR3-205ENST00000468143 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 GABRDO14764 452 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 PI15O43692 258 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
CDHR3-205ENST00000468143 CLSTN1O94985 981 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 CYP2F1P24903 491 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 VIPR2P41587 438 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 LHX1P48742 406 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 EPHA5P54756 1037 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
CDHR3-205ENST00000468143 KCNB1Q14721 858 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 TAF12Q16514 161 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 DDR2Q16832 855 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 WDR72Q3MJ13 1102 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
CDHR3-205ENST00000468143 STXBP5Q5T5C0 1151 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 ISM2Q6H9L7 571 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 TMEM105Q8N8V8 129 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 SPPL2BQ8TCT7 592 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 C2orf15Q8WU43 125 aaKnown RBP12.38□□□□□ -0.43
CDHR3-205ENST00000468143 KBTBD7Q8WVZ9 684 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 ATXN3LQ9H3M9 355 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 GDE1Q9NZC3 331 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 HSFX1Q9UBD0 423 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 NXF1Q9UBU9 619 aaKnown RBP12.38□□□□□ -0.43
CDHR3-205ENST00000468143 WNT16Q9UBV4 365 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 TRAF3IP3Q9Y228 551 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 SCN1AP35498 2009 aa12.38□□□□□ -0.43
CDHR3-205ENST00000468143 MICAL2O94851 1124 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 KIF20AO95235 890 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 C4BPAP04003 597 aaKnown RBP12.37□□□□□ -0.43
CDHR3-205ENST00000468143 GABRR2P28476 465 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 TNNC1P63316 161 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 FAM160A1Q05DH4 1040 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 SMARCB1Q12824 385 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 GRM2Q14416 872 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 VEPH1Q14D04 833 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
CDHR3-205ENST00000468143 ASTLQ6HA08 431 aaPredicted RBP12.37□□□□□ -0.43
CDHR3-205ENST00000468143 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 LIMS2Q7Z4I7 341 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 ITIH5Q86UX2 942 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 GUF1Q8N442 669 aaKnown RBP12.37□□□□□ -0.43
CDHR3-205ENST00000468143 LEMD2Q8NC56 503 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 PRSS33Q8NF86 280 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 OR6B3Q8NGW1 331 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 ZSCAN18Q8TBC5 510 aaPredicted RBP12.37□□□□□ -0.43
CDHR3-205ENST00000468143 FAM122AQ96E09 287 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 EEF2KMTQ96G04 330 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 CCDC34Q96HJ3 373 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 PKMYT1Q99640 499 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 SLITRK6Q9H5Y7 841 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 ZFP14Q9HCL3 533 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDHR3-205ENST00000468143 SLC2A4RGQ9NR83 387 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 MAGED2Q9UNF1 606 aaPredicted RBP12.37□□□□□ -0.43
CDHR3-205ENST00000468143 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 ASB3Q9Y575 518 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 NME7Q9Y5B8 376 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
CDHR3-205ENST00000468143 ECI2O75521 394 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms