RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 ITIH5Q86UX2 942 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 TTC9BQ8N6N2 239 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 ZNF516Q92618 1163 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 PSMG2Q969U7 264 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 CCDC47Q96A33 483 aaKnown RBP19.5■□□□□ 0.71
CGREF1-208ENST00000467539 ELSPBP1Q96BH3 223 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 CCDC127Q96BQ5 260 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 CGRRF1Q99675 332 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 DDX43Q9NXZ2 648 aaKnown RBP19.5■□□□□ 0.71
CGREF1-208ENST00000467539 TCHHQ07283 1943 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 MUC6Q6W4X9 2439 aa19.5■□□□□ 0.71
CGREF1-208ENST00000467539 NRG2O14511 850 aaPredicted RBP19.49■□□□□ 0.71
CGREF1-208ENST00000467539 KIF20AO95235 890 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 PRR29P0C7W0 189 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 HAPLN1P10915 354 aaPredicted RBP19.49■□□□□ 0.71
CGREF1-208ENST00000467539 MYL7Q01449 175 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 TSPY1Q01534 308 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 NFE2Q16621 373 aaPredicted RBP19.49■□□□□ 0.71
CGREF1-208ENST00000467539 FAM78AQ5JUQ0 283 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 TMC8Q8IU68 726 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 TMEM105Q8N8V8 129 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 PRSS33Q8NF86 280 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 FLCNQ8NFG4 579 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 ZSWIM3Q96MP5 696 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 KXD1Q9BQD3 176 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 PLA2G2FQ9BZM2 168 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
CGREF1-208ENST00000467539 TRPV4Q9HBA0 871 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 TMLHEQ9NVH6 421 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 PCDHB5Q9Y5E4 795 aa19.49■□□□□ 0.71
CGREF1-208ENST00000467539 SOAT2O75908 522 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 FGF19O95750 216 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 AOC1P19801 751 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 CLDN10P78369 228 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 KCNB1Q14721 858 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 MGAT5BQ3V5L5 792 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 PHLDB3Q6NSJ2 640 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 OSTM1Q86WC4 334 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 SHKBP1Q8TBC3 707 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 PARD3BQ8TEW8 1205 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 SMARCD2Q92925 531 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 ASB16Q96NS5 453 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 ZFP14Q9HCL3 533 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 CA14Q9ULX7 337 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 TRAF3IP3Q9Y228 551 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 WDFY4Q6ZS81 3184 aa19.48■□□□□ 0.71
CGREF1-208ENST00000467539 PI15O43692 258 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 GJA1P17302 382 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 FCARP24071 287 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 PCSK1P29120 753 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 AP3M2P53677 418 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 PTPN5P54829 565 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 PFKPQ01813 784 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 TEAD2Q15562 447 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 INTS6LQ5JSJ4 861 aaKnown RBP19.47■□□□□ 0.71
CGREF1-208ENST00000467539 CWF19L1Q69YN2 538 aaKnown RBP19.47■□□□□ 0.71
CGREF1-208ENST00000467539 GAREM2Q75VX8 874 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 ADGRF2Q8IZF7 708 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 FMR1NBQ8N0W7 255 aaPredicted RBP19.47■□□□□ 0.71
CGREF1-208ENST00000467539 CCDC34Q96HJ3 373 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 PKMYT1Q99640 499 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 SEPT5Q99719 369 aaPredicted RBP19.47■□□□□ 0.71
CGREF1-208ENST00000467539 ABI2Q9NYB9 513 aaPredicted RBP19.47■□□□□ 0.71
CGREF1-208ENST00000467539 GTF3C4Q9UKN8 822 aa19.47■□□□□ 0.71
CGREF1-208ENST00000467539 GOLGA6L4A6NEF3 574 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 STK25O00506 426 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 GALR2O43603 387 aaPredicted RBP19.46■□□□□ 0.71
CGREF1-208ENST00000467539 STAU1O95793 577 aaKnown RBP19.46■□□□□ 0.71
CGREF1-208ENST00000467539 ATF6P18850 670 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 ATICP31939 592 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 CDR1P51861 262 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 STARD6P59095 220 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 NHLH1Q02575 133 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 TCF15Q12870 199 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 VEPH1Q14D04 833 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 SLC44A4Q53GD3 710 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 FAM171BQ6P995 826 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 FAM200AQ8TCP9 573 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 PLEKHO2Q8TD55 490 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 E2F7Q96AV8 911 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 SHDQ96IW2 340 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 IRF2BPLQ9H1B7 796 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 ZNF334Q9HCZ1 680 aaPredicted RBP19.46■□□□□ 0.71
CGREF1-208ENST00000467539 ABCB6Q9NP58 842 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 ARHGEF3Q9NR81 526 aa19.46■□□□□ 0.71
CGREF1-208ENST00000467539 A0A1W2PRU2 124 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 CALUO43852 315 aaPredicted RBP19.45■□□□□ 0.7
CGREF1-208ENST00000467539 TACC1O75410 805 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 C4BPAP04003 597 aaKnown RBP19.45■□□□□ 0.7
CGREF1-208ENST00000467539 NR3C1P04150 777 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 WARSP23381 471 aaKnown RBP19.45■□□□□ 0.7
CGREF1-208ENST00000467539 ACAT1P24752 427 aaKnown RBP19.45■□□□□ 0.7
CGREF1-208ENST00000467539 LMO2P25791 158 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 TRPC3Q13507 836 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 SNW1Q13573 536 aaKnown RBP19.45■□□□□ 0.7
CGREF1-208ENST00000467539 NFIL3Q16649 462 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 GUF1Q8N442 669 aaKnown RBP19.45■□□□□ 0.7
CGREF1-208ENST00000467539 ENGASEQ8NFI3 743 aa19.45■□□□□ 0.7
CGREF1-208ENST00000467539 ZSCAN18Q8TBC5 510 aaPredicted RBP19.45■□□□□ 0.7
CGREF1-208ENST00000467539 GIPC2Q8TF65 315 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms