RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 DEFB118Q96PH6 123 aa13.05□□□□□ -0.32
HDLBP-231ENST00000467435 EPC1Q9H2F5 836 aa13.05□□□□□ -0.32
HDLBP-231ENST00000467435 RSAD1Q9HA92 442 aa13.05□□□□□ -0.32
HDLBP-231ENST00000467435 MRPL47Q9HD33 250 aaKnown RBP13.05□□□□□ -0.32
HDLBP-231ENST00000467435 GDAP2Q9NXN4 497 aa13.05□□□□□ -0.32
HDLBP-231ENST00000467435 KIAA1257Q9ULG3 409 aa13.05□□□□□ -0.32
HDLBP-231ENST00000467435 A0A0U1RQF3 1178 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 CEP104O60308 925 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 THP07101 528 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 CCL5P13501 91 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 MBTPS1Q14703 1052 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 STILQ15468 1287 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 CNGA2Q16280 664 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 PTPN20Q4JDL3 420 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 DNAJC24Q6P3W2 148 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 LRRC8DQ7L1W4 858 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 ACOT1Q86TX2 421 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 UNC93AQ86WB7 457 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 FAM126BQ8IXS8 530 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 WDTC1Q8N5D0 677 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 TOP6BLQ8N6T0 577 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 UBL4BQ8N7F7 174 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 MSANTD4Q8NCY6 345 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 GSTCDQ8NEC7 633 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 APPL2Q8NEU8 664 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 SPATA4Q8NEY3 305 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 KBTBD7Q8WVZ9 684 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-231ENST00000467435 PARVAQ9NVD7 372 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-231ENST00000467435 MIOSQ9NXC5 875 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 NME7Q9Y5B8 376 aa13.04□□□□□ -0.32
HDLBP-231ENST00000467435 A8MXQ7 604 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 PGRMC1O00264 195 aaKnown RBP13.03□□□□□ -0.32
HDLBP-231ENST00000467435 PODXLO00592 558 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 RHOXF2BP0C7M4 288 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 FGFR1P11362 822 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 SELPP16109 830 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 CTNNA2P26232 953 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 CTNNA1P35221 906 aaKnown RBP13.03□□□□□ -0.32
HDLBP-231ENST00000467435 CDK7P50613 346 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 AFF1P51825 1210 aaKnown RBP13.03□□□□□ -0.32
HDLBP-231ENST00000467435 LILRA4P59901 499 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 GRIK3Q13003 919 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 MAMLD1Q13495 774 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 BFSP2Q13515 415 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 CYP4A22Q5TCH4 519 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 DCAF12L1Q5VU92 463 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 FBXO38Q6PIJ6 1188 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 LCLAT1Q6UWP7 414 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 ECHDC2Q86YB7 292 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 CPNE8Q86YQ8 564 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 ADGRF2Q8IZF7 708 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 FEZF2Q8TBJ5 459 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 ACTRT1Q8TDG2 376 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 UBE2Q2Q8WVN8 375 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 RHOXF2Q9BQY4 288 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 TRIM7Q9C029 511 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 RNF208Q9H0X6 261 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 CARD9Q9H257 536 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 DPEP3Q9H4B8 488 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 ANKZF1Q9H8Y5 726 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 UBN1Q9NPG3 1134 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 CACNG4Q9UBN1 327 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 CYTH4Q9UIA0 394 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 TSPAN16Q9UKR8 245 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 OGDHLQ9ULD0 1010 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 L1RE1Q9UN81 338 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
HDLBP-231ENST00000467435 TCRBV5S1A1TA0A578 114 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 CASTOR2A6NHX0 329 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 MYO1FO00160 1098 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 HCRTO43612 131 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 HUS1O60921 280 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 PROSCO94903 275 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 GJB6O95452 261 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 WARSP23381 471 aaKnown RBP13.02□□□□□ -0.33
HDLBP-231ENST00000467435 SLC1A1P43005 524 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 MARCKSL1P49006 195 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 GSCP56915 257 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-231ENST00000467435 RNASE9P60153 205 aaKnown RBP13.02□□□□□ -0.33
HDLBP-231ENST00000467435 RBM10P98175 930 aaKnown RBP13.02□□□□□ -0.33
HDLBP-231ENST00000467435 TAP1Q03518 808 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 PDCLQ13371 301 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 CCDC70Q6NSX1 233 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 LIMS2Q7Z4I7 341 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
HDLBP-231ENST00000467435 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 MMGT1Q8N4V1 131 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 C3orf20Q8ND61 904 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-231ENST00000467435 UBA3Q8TBC4 463 aa13.02□□□□□ -0.33
HDLBP-231ENST00000467435 IPO4Q8TEX9 1081 aaKnown RBP13.02□□□□□ -0.33
HDLBP-231ENST00000467435 LINC01599Q8WXQ3 324 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms