RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 VPS4BO75351 444 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 UBXN7O94888 489 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 SUN1O94901 812 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 KIF20AO95235 890 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 HDCP19113 662 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 HTR1BP28222 390 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 ABCG1P45844 678 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 CACNA2D1P54289 1103 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 FPGSQ05932 587 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 PIGFQ07326 219 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 HABP2Q14520 560 aaPredicted RBP5.34□□□□□ -1.55
SMC4-207ENST00000467263 PREPLQ4J6C6 727 aaPredicted RBP5.34□□□□□ -1.55
SMC4-207ENST00000467263 EPHA10Q5JZY3 1008 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 TAPT1Q6NXT6 567 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 CLNKQ7Z7G1 428 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 BRIX1Q8TDN6 353 aaKnown RBP5.34□□□□□ -1.55
SMC4-207ENST00000467263 ACTRT2Q8TDY3 377 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 ANKS1AQ92625 1134 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 GPR35Q9HC97 309 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.34□□□□□ -1.55
SMC4-207ENST00000467263 CPA4Q9UI42 421 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 ZDHHC8Q9ULC8 765 aa5.34□□□□□ -1.55
SMC4-207ENST00000467263 A0A1W2PS29 197 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 H3BML4 177 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 M0QYG6 137 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 TSPAN6O43657 245 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 CTNND1O60716 968 aaKnown RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 GNAI2P04899 355 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 CHRM3P20309 590 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 RPS7P62081 194 aaKnown RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 RAB1AP62820 205 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 POU6F2P78424 691 aaPredicted RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 MRPS35P82673 323 aaKnown RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 DYRK1AQ13627 763 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 KHDC1LQ5JSQ8 128 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 CXorf57Q6NSI4 855 aaKnown RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 BHLHA9Q7RTU4 235 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 COL23A1Q86Y22 540 aaPredicted RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 SSH3Q8TE77 659 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 MTFMTQ96DP5 389 aaKnown RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 NT5C1BQ96P26 610 aa5.33□□□□□ -1.56
SMC4-207ENST00000467263 TINAGL1Q9GZM7 467 aaPredicted RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 SARS2Q9NP81 518 aaKnown RBP5.33□□□□□ -1.56
SMC4-207ENST00000467263 GATA3P23771 443 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 ANXA11P50995 505 aaKnown RBP5.32□□□□□ -1.56
SMC4-207ENST00000467263 SOX8P57073 446 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 MLC1Q15049 377 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 OVCH2Q7RTZ1 564 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 DAAM2Q86T65 1068 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 USP37Q86T82 979 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 TCEAL8Q8IYN2 117 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 ADGRG5Q8IZF4 528 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 MAGEB6Q8N7X4 407 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 SLC30A5Q8TAD4 765 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 SNX19Q92543 992 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 RUNDC1Q96C34 613 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 SMOC2Q9H3U7 446 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 ETAA1Q9NY74 926 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 LRIT1Q9P2V4 623 aa5.32□□□□□ -1.56
SMC4-207ENST00000467263 A0A088AWK7 358 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 CHEK2O96017 543 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 U2AF1L5P0DN76 240 aaPredicted RBP5.31□□□□□ -1.56
SMC4-207ENST00000467263 KCNJ5P48544 419 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 U2AF1Q01081 240 aaKnown RBP eCLIP5.31□□□□□ -1.565e-12■■■■■ 47.2
SMC4-207ENST00000467263 FGL2Q14314 439 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 SF3B3Q15393 1217 aaKnown RBP5.31□□□□□ -1.56
SMC4-207ENST00000467263 MINDY4Q4G0A6 757 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 ARHGAP29Q52LW3 1261 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 NXNQ6DKJ4 435 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 TAF2Q6P1X5 1199 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 NPNTQ6UXI9 565 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 MYO1HQ8N1T3 1032 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 PSD4Q8NDX1 1056 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 FAM46DQ8NEK8 389 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 CNPPD1Q9BV87 410 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 B3GNT5Q9BYG0 378 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 INTS13Q9NVM9 706 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 KCTD5Q9NXV2 234 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 ARPP21Q9UBL0 812 aaPredicted RBP5.31□□□□□ -1.56
SMC4-207ENST00000467263 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.31□□□□□ -1.56
SMC4-207ENST00000467263 NEU2Q9Y3R4 380 aa5.31□□□□□ -1.56
SMC4-207ENST00000467263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMC4-207ENST00000467263 WIPF3A6NGB9 483 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 DNAJB5O75953 348 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 ITGB6P18564 788 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 LLGL1Q15334 1064 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 ZNF788Q6ZQV5 615 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 TSHZ1Q6ZSZ6 1077 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 TMPRSS9Q7Z410 1059 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 WDR75Q8IWA0 830 aaKnown RBP5.3□□□□□ -1.56
SMC4-207ENST00000467263 POC1BQ8TC44 478 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 SCARB1Q8WTV0 552 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 LPIN2Q92539 896 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 ZNF778Q96MU6 729 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 SIK2Q9H0K1 926 aa5.3□□□□□ -1.56
SMC4-207ENST00000467263 ZMAT3Q9HA38 289 aaKnown RBP5.3□□□□□ -1.56
SMC4-207ENST00000467263 DDX20Q9UHI6 824 aaKnown RBP5.3□□□□□ -1.56
SMC4-207ENST00000467263 F5H697 171 aa5.29□□□□□ -1.56
SMC4-207ENST00000467263 TUSC2O75896 110 aa5.29□□□□□ -1.56
SMC4-207ENST00000467263 UNC5CO95185 931 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms