RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 RNF8O76064 485 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 GARTP22102 1010 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 STAT2P52630 851 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 GPX6P59796 221 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 ADCY1Q08828 1119 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 NFIAQ12857 509 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 SEPT7Q16181 437 aaKnown RBP16.38■□□□□ 0.21
CHD1L-205ENST00000467213 SV2AQ7L0J3 742 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 MIER3Q7Z3K6 550 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 CBWD2Q8IUF1 395 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 TRIM42Q8IWZ5 723 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 C4orf19Q8IY42 314 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 VPS52Q8N1B4 723 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 UCMAQ8WVF2 138 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 HEMGNQ9BXL5 484 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 DNPEPQ9ULA0 475 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 TBX20Q9UMR3 447 aa16.38■□□□□ 0.21
CHD1L-205ENST00000467213 RAD21O60216 631 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 KRT36O76013 467 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 ARP10275 920 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 NEK3P51956 506 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 HSPA2P54652 639 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 FOXB2Q5VYV0 432 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 RFWD2Q8NHY2 731 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 SENP7Q9BQF6 1050 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 VCX3BQ9H321 246 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 VCX3AQ9NNX9 186 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 KRT82Q9NSB4 513 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 C1orf112Q9NSG2 853 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 ANKEF1Q9NU02 776 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 PARVAQ9NVD7 372 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 KCNK4Q9NYG8 393 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 CNTN3Q9P232 1028 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 CLUHO75153 1309 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 ADRA1DP25100 572 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
CHD1L-205ENST00000467213 ARL4CP56559 192 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 NOMO3P69849 1222 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 XIAPP98170 497 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 GPS1Q13098 491 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 HIF1AQ16665 826 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 RNF220Q5VTB9 566 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 AAGABQ6PD74 315 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 CCDC174Q6PII3 467 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 PPIL6Q8IXY8 311 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 ZBED8Q8IZ13 594 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 FEZF2Q8TBJ5 459 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 RAB3IL1Q8TBN0 382 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 TCP10LQ8TDR4 215 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 DCAKDQ8WVC6 231 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
CHD1L-205ENST00000467213 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
CHD1L-205ENST00000467213 ZNF148Q9UQR1 794 aa16.37■□□□□ 0.21
CHD1L-205ENST00000467213 SPAG6O75602 509 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 ESRRAP11474 423 aaPredicted RBP16.36■□□□□ 0.21
CHD1L-205ENST00000467213 CRKP46108 304 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 TAP1Q03518 808 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 TMCO4Q5TGY1 634 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 KYAT3Q6YP21 454 aaKnown RBP16.36■□□□□ 0.21
CHD1L-205ENST00000467213 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 MYLK4Q86YV6 388 aaPredicted RBP16.36■□□□□ 0.21
CHD1L-205ENST00000467213 ABRAQ8N0Z2 381 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 TMEM161BQ8NDZ6 487 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 STKLD1Q8NE28 680 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 SLC35B2Q8TB61 432 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 CCDC110Q8TBZ0 833 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 HAPLN3Q96S86 360 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 PIDD1Q9HB75 910 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 CCNL1Q9UK58 526 aaPredicted RBP16.36■□□□□ 0.21
CHD1L-205ENST00000467213 SORCS3Q9UPU3 1222 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 CAPN14A8MX76 684 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
CHD1L-205ENST00000467213 MAP3K13O43283 966 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 IKQ13123 557 aaPredicted RBP16.36■□□□□ 0.21
CHD1L-205ENST00000467213 FASTKD3Q14CZ7 662 aaKnown RBP16.36■□□□□ 0.21
CHD1L-205ENST00000467213 DNAL1Q4LDG9 190 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 SH2D5Q6ZV89 423 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 NIPA2Q8N8Q9 360 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 OLFM3Q96PB7 478 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 GBP5Q96PP8 586 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 MKS1Q9NXB0 559 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 PPME1Q9Y570 386 aa16.36■□□□□ 0.21
CHD1L-205ENST00000467213 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 UBR3Q6ZT12 1888 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 FKBP6O75344 327 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 KRT5P13647 590 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 SNAP25P60880 206 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 PDIA2Q13087 525 aaKnown RBP16.35■□□□□ 0.21
CHD1L-205ENST00000467213 RINLQ6ZS11 566 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 NLRX1Q86UT6 975 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 ZC3H18Q86VM9 953 aaKnown RBP16.35■□□□□ 0.21
CHD1L-205ENST00000467213 ZSWIM2Q8NEG5 633 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 OXNAD1Q96HP4 312 aaPredicted RBP16.35■□□□□ 0.21
CHD1L-205ENST00000467213 APOPT1Q96IL0 206 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 C7orf26Q96N11 449 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 PAFAH2Q99487 392 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 TMEM120AQ9BXJ8 343 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 FAM198AQ9UFP1 575 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 STRIP2Q9ULQ0 834 aa16.35■□□□□ 0.21
CHD1L-205ENST00000467213 IQANK1A0A1B0GTG1 560 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms