RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 OSBPL9Q96SU4 736 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 ACO2Q99798 780 aaKnown RBP4.96□□□□□ -1.62
VPS13D-203ENST00000466732 LRFN3Q9BTN0 628 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 DUSP26Q9BV47 211 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 STAP2Q9UGK3 403 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 CPA4Q9UI42 421 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.96□□□□□ -1.62
VPS13D-203ENST00000466732 RAD54BQ9Y620 910 aa4.96□□□□□ -1.62
VPS13D-203ENST00000466732 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 ADM5C9JUS6 153 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 DNAJB5O75953 348 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 CHRM2P08172 466 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 PIM1P11309 404 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-203ENST00000466732 ITGALP20701 1170 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 KCNJ5P48544 419 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 MAPK10P53779 464 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 NXPH1P58417 271 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 ITIH3Q06033 890 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 FGL2Q14314 439 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 LRRC41Q15345 812 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 NFE2Q16621 373 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-203ENST00000466732 NBPF8Q3BBV2 869 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 ZNF362Q5T0B9 420 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-203ENST00000466732 DAAM2Q86T65 1068 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 PEG10Q86TG7 708 aaKnown RBP4.95□□□□□ -1.62
VPS13D-203ENST00000466732 ADGRG3Q86Y34 549 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 CHPFQ8IZ52 775 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 FAM98AQ8NCA5 519 aaKnown RBP4.95□□□□□ -1.62
VPS13D-203ENST00000466732 ZBTB34Q8NCN2 500 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 BBC3Q96PG8 261 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-203ENST00000466732 HEPHQ9BQS7 1158 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 AMBRA1Q9C0C7 1298 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 R3HDMLQ9H3Y0 253 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 KIAA1586Q9HCI6 787 aa4.95□□□□□ -1.62
VPS13D-203ENST00000466732 NOB1Q9ULX3 412 aaKnown RBP4.95□□□□□ -1.62
VPS13D-203ENST00000466732 WDR27A2RRH5 827 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 PRPF3O43395 683 aaKnown RBP4.94□□□□□ -1.62
VPS13D-203ENST00000466732 UNC5CO95185 931 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 SCGB1D2O95969 90 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 MYBP10242 640 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 GRIA3P42263 894 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 GCLCP48506 637 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-203ENST00000466732 CACNA2D1P54289 1103 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 PPP2R5AQ15172 486 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 TXNRD1Q16881 649 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 RBM20Q5T481 1227 aaKnown RBP4.94□□□□□ -1.62
VPS13D-203ENST00000466732 CXorf57Q6NSI4 855 aaKnown RBP4.94□□□□□ -1.62
VPS13D-203ENST00000466732 FBXO42Q6P3S6 717 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 JDP2Q8WYK2 163 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 MRGPRX1Q96LB2 322 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 SLC46A1Q96NT5 459 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 TPSD1Q9BZJ3 242 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 CNNM1Q9NRU3 951 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 HESX1Q9UBX0 185 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 EID1Q9Y6B2 187 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS13D-203ENST00000466732 ADGRA2Q96PE1 1338 aa4.94□□□□□ -1.62
VPS13D-203ENST00000466732 CCDC151A5D8V7 595 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 VWC2LB2RUY7 222 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 DCLK1O15075 740 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 CTNND1O60716 968 aaKnown RBP4.93□□□□□ -1.62
VPS13D-203ENST00000466732 TUSC2O75896 110 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 RHOP08100 348 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 CD6P30203 668 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 ZNF134P52741 427 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 LONRF3Q496Y0 759 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 FAM102BQ5T8I3 360 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 VPS53Q5VIR6 699 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 OVCH2Q7RTZ1 564 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 RD3Q7Z3Z2 195 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 ANKRD13AQ8IZ07 590 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 FAM109AQ8N4B1 249 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 BOLLQ8N9W6 283 aaKnown RBP4.93□□□□□ -1.62
VPS13D-203ENST00000466732 FAM136AQ96C01 138 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 RUNDC1Q96C34 613 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 NT5C1BQ96P26 610 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 ACTRT3Q9BYD9 372 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 TTYH3Q9C0H2 523 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 KLC4Q9NSK0 619 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 SLC17A6Q9P2U8 582 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 MED16Q9Y2X0 877 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 PLEKHM1Q9Y4G2 1056 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 COX11Q9Y6N1 276 aa4.93□□□□□ -1.62
VPS13D-203ENST00000466732 ORC4O43929 436 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 GRPP07492 148 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 ELFN1P0C7U0 828 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 U2AF1L5P0DN76 240 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-203ENST00000466732 AGFG1P52594 562 aaKnown RBP4.92□□□□□ -1.62
VPS13D-203ENST00000466732 U2AF1Q01081 240 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS13D-203ENST00000466732 ANO6Q4KMQ2 910 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 AMOTQ4VCS5 1084 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 TMEM108Q6UXF1 575 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 NPNTQ6UXI9 565 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 ZNF575Q86XF7 245 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 COL23A1Q86Y22 540 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-203ENST00000466732 TCEAL8Q8IYN2 117 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 P2RX7Q99572 595 aaKnown RBP4.92□□□□□ -1.62
VPS13D-203ENST00000466732 SPATA5L1Q9BVQ7 753 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 KLK15Q9H2R5 256 aa4.92□□□□□ -1.62
VPS13D-203ENST00000466732 IL17RBQ9NRM6 502 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms