RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 HPSEQ9Y251 543 aa17.91■□□□□ 0.46
SDHB-203ENST00000466613 ATP6V1DQ9Y5K8 247 aa17.91■□□□□ 0.46
SDHB-203ENST00000466613 DENND4CQ5VZ89 1909 aa17.91■□□□□ 0.46
SDHB-203ENST00000466613 TICRRQ7Z2Z1 1910 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 COL4A2P08572 1712 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 A0A1W2PRU2 124 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 CLIC2O15247 247 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 CYP2J2P51589 502 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 TSPY1Q01534 308 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 PRKCQQ04759 706 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 SNW1Q13573 536 aaKnown RBP17.9■□□□□ 0.46
SDHB-203ENST00000466613 MLF2Q15773 248 aaPredicted RBP17.9■□□□□ 0.46
SDHB-203ENST00000466613 DUOXA2Q1HG44 320 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 SLC44A4Q53GD3 710 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 DNAJB7Q7Z6W7 309 aaPredicted RBP17.9■□□□□ 0.46
SDHB-203ENST00000466613 C12orf56Q8IXR9 622 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 TOP6BLQ8N6T0 577 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 DTWD2Q8NBA8 298 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 XXYLT1Q8NBI6 393 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 SPATA18Q8TC71 538 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 DDX43Q9NXZ2 648 aaKnown RBP17.9■□□□□ 0.46
SDHB-203ENST00000466613 R3HCC1Q9Y3T6 440 aaKnown RBP17.9■□□□□ 0.46
SDHB-203ENST00000466613 SNX9Q9Y5X1 595 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 OBSL1O75147 1896 aa17.9■□□□□ 0.46
SDHB-203ENST00000466613 FGF19O95750 216 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 ATF6P18850 670 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 CDR1P51861 262 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 MYL7Q01449 175 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 MYO1EQ12965 1108 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 VEPH1Q14D04 833 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
SDHB-203ENST00000466613 KNOP1Q1ED39 458 aaKnown RBP17.89■□□□□ 0.45
SDHB-203ENST00000466613 RDH13Q8NBN7 331 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 ZSCAN18Q8TBC5 510 aaPredicted RBP17.89■□□□□ 0.45
SDHB-203ENST00000466613 FAM200AQ8TCP9 573 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 LPIN3Q9BQK8 851 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 ACBD6Q9BR61 282 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 DDX23Q9BUQ8 820 aaKnown RBP17.89■□□□□ 0.45
SDHB-203ENST00000466613 FOXQ1Q9C009 403 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 SLITRK6Q9H5Y7 841 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 TRPV4Q9HBA0 871 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 ZNF334Q9HCZ1 680 aaPredicted RBP17.89■□□□□ 0.45
SDHB-203ENST00000466613 EXOC1Q9NV70 894 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 ABI2Q9NYB9 513 aaPredicted RBP17.89■□□□□ 0.45
SDHB-203ENST00000466613 SIT1Q9Y3P8 196 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 PCDHB5Q9Y5E4 795 aa17.89■□□□□ 0.45
SDHB-203ENST00000466613 FAM237AA0A1B0GTK4 181 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 PRPF40AO75400 957 aaKnown RBP17.88■□□□□ 0.45
SDHB-203ENST00000466613 MYL1P05976 194 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 DLATP10515 647 aaKnown RBP17.88■□□□□ 0.45
SDHB-203ENST00000466613 HAPLN1P10915 354 aaPredicted RBP17.88■□□□□ 0.45
SDHB-203ENST00000466613 CYP24A1Q07973 514 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 STK4Q13043 487 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 PSMD2Q13200 908 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 GRM2Q14416 872 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 PSMD6Q15008 389 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 VITQ6UXI7 678 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 OSTM1Q86WC4 334 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 ADGRF2Q8IZF7 708 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 KIAA0895Q8NCT3 520 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 PJA1Q8NG27 643 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 DNASE1L2Q92874 299 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 HPDLQ96IR7 371 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 FNBP1Q96RU3 617 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 CGRRF1Q99675 332 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 SCAND2PQ9GZW5 306 aaPredicted RBP17.88■□□□□ 0.45
SDHB-203ENST00000466613 TMLHEQ9NVH6 421 aa17.88■□□□□ 0.45
SDHB-203ENST00000466613 PATJQ8NI35 1801 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 KANSL1LA0AUZ9 987 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 GABRDO14764 452 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 PSMC3P17980 439 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 TNNI1P19237 187 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 ACAT1P24752 427 aaKnown RBP17.87■□□□□ 0.45
SDHB-203ENST00000466613 GABRR2P28476 465 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 SYKP43405 635 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 LHX1P48742 406 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 SOWAHAQ2M3V2 549 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 KMT5BQ4FZB7 885 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 INTS6LQ5JSJ4 861 aaKnown RBP17.87■□□□□ 0.45
SDHB-203ENST00000466613 STXBP5Q5T5C0 1151 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 GAREM2Q75VX8 874 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 DPH6Q7L8W6 267 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 TRAPPC11Q7Z392 1133 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 GOLGA5Q8TBA6 731 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 DEPDC1BQ8WUY9 529 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 E2F7Q96AV8 911 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 CCDC127Q96BQ5 260 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 PKMYT1Q99640 499 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 TRMT61BQ9BVS5 477 aaKnown RBP17.87■□□□□ 0.45
SDHB-203ENST00000466613 ATXN3LQ9H3M9 355 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 BRD9Q9H8M2 597 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 DLGAP2Q9P1A6 1054 aa17.87■□□□□ 0.45
SDHB-203ENST00000466613 PTPRDP23468 1912 aa17.86■□□□□ 0.45
SDHB-203ENST00000466613 EXOC3O60645 756 aa17.86■□□□□ 0.45
SDHB-203ENST00000466613 DCNP07585 359 aaKnown RBP17.86■□□□□ 0.45
SDHB-203ENST00000466613 VIPR2P41587 438 aa17.86■□□□□ 0.45
SDHB-203ENST00000466613 NDUFA8P51970 172 aa17.86■□□□□ 0.45
SDHB-203ENST00000466613 ANGPT1Q15389 498 aa17.86■□□□□ 0.45
SDHB-203ENST00000466613 TAF12Q16514 161 aa17.86■□□□□ 0.45
SDHB-203ENST00000466613 TPRG1Q6ZUI0 275 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms