RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 URODP06132 367 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 ADRB2P07550 413 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 DLATP10515 647 aaKnown RBP10.69□□□□□ -0.7
PMF1-204ENST00000466489 RFX1P22670 979 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 CA8P35219 290 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 PNPLA4P41247 253 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 AFF1P51825 1210 aaKnown RBP10.69□□□□□ -0.7
PMF1-204ENST00000466489 CYP24A1Q07973 514 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 CUL1Q13616 776 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 MTF1Q14872 753 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 DUOXA2Q1HG44 320 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 SPDYCQ5MJ68 293 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 EMC10Q5UCC4 262 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 SFMBT2Q5VUG0 894 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 ANKRD40Q6AI12 368 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 SMYD5Q6GMV2 418 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 JADE1Q6IE81 842 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 PDXDC1Q6P996 788 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 DCLRE1AQ6PJP8 1040 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 CRELD2Q6UXH1 353 aaPredicted RBP10.69□□□□□ -0.7
PMF1-204ENST00000466489 Q7L0L9 218 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 FRMD5Q7Z6J6 570 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 DDX53Q86TM3 631 aaKnown RBP10.69□□□□□ -0.7
PMF1-204ENST00000466489 TAX1BP1Q86VP1 789 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 CBWD2Q8IUF1 395 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 WDR49Q8IV35 697 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 FAM186BQ8IYM0 893 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 LRRC45Q96CN5 670 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 MRPL38Q96DV4 380 aaKnown RBP10.69□□□□□ -0.7
PMF1-204ENST00000466489 MKNK1Q9BUB5 465 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 NGRNQ9NPE2 291 aaKnown RBP10.69□□□□□ -0.7
PMF1-204ENST00000466489 HCSTQ9UBK5 93 aa10.69□□□□□ -0.7
PMF1-204ENST00000466489 GTPBP10A4D1E9 387 aaKnown RBP10.68□□□□□ -0.7
PMF1-204ENST00000466489 NT5C1B-RDH14C9J2C7 533 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 TMEM189-UBE2V1I3L0A0 370 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 EBAG9O00559 213 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 SLC16A3O15427 465 aaKnown RBP10.68□□□□□ -0.7
PMF1-204ENST00000466489 NFICP08651 508 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 RHOXF2BP0C7M4 288 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 LINC00271P0C7V0 271 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 LRPAP1P30533 357 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 PBX3P40426 434 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 CLCNKBP51801 687 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 KIF11P52732 1056 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 CREMQ03060 361 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 ENPEPQ07075 957 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 MYO1EQ12965 1108 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 MTMR3Q13615 1198 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 PSMD6Q15008 389 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 UPP1Q16831 310 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 USP41Q3LFD5 358 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 TMC7Q7Z402 723 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 MAATS1Q7Z4T9 603 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 EFCAB13Q8IY85 973 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 MREGQ8N565 214 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 ACRBPQ8NEB7 543 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 POF1BQ8WVV4 589 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 CCDC127Q96BQ5 260 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 ZMAT2Q96NC0 199 aaKnown RBP10.68□□□□□ -0.7
PMF1-204ENST00000466489 CDX2Q99626 313 aaPredicted RBP10.68□□□□□ -0.7
PMF1-204ENST00000466489 CGRRF1Q99675 332 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 DUSP9Q99956 384 aaKnown RBP10.68□□□□□ -0.7
PMF1-204ENST00000466489 TCF25Q9BQ70 676 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 RHOXF2Q9BQY4 288 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 FAM129AQ9BZQ8 928 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 MMRN2Q9H8L6 949 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 ALG13Q9NP73 1137 aaKnown RBP10.68□□□□□ -0.7
PMF1-204ENST00000466489 PLCB1Q9NQ66 1216 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 DMAC2Q9NW81 257 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 MTMR10Q9NXD2 777 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 DPP3Q9NY33 737 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 AIPL1Q9NZN9 384 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 STIM2Q9P246 746 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 ITGA11Q9UKX5 1188 aa10.68□□□□□ -0.7
PMF1-204ENST00000466489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.68□□□□□ -0.75e-26■■■■■ 153.1
PMF1-204ENST00000466489 ATXN2Q99700 1313 aaKnown RBP10.67□□□□□ -0.7
PMF1-204ENST00000466489 GOLGA6CA6NDK9 693 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 CCDC188H7C350 402 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 GRM6O15303 877 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 PHACTR2O75167 634 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 SASH3O75995 380 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 KIF4AO95239 1232 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 SOD2P04179 222 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 KRT19P08727 400 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 GOLGA6DP0CG33 693 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 SRGAP2BP0DMP2 458 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 MAGEA9P43362 315 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 GLUD2P49448 558 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 VSNL1P62760 191 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 RBP5P82980 135 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 CETN1Q12798 172 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 BIRC3Q13489 604 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 TRPC3Q13507 836 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 NAB2Q15742 525 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 ZBTB6Q15916 424 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 SV2CQ496J9 727 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 CCDC40Q4G0X9 1142 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 FUT10Q6P4F1 479 aa10.67□□□□□ -0.7
PMF1-204ENST00000466489 ELMSAN1Q6PJG2 1045 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms