RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 EVPLQ92817 2033 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 KIAA0355O15063 1070 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 NKRFO15226 690 aaKnown RBP eCLIP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 PRPF3O43395 683 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 NOBOXO60393 691 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 GH1P01241 217 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 C8BP07358 591 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 ARP10275 920 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 NAT2P11245 290 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 CYP2C9P11712 490 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 SCG2P13521 617 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 FDPSP14324 419 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 KCNA2P16389 499 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 IFNAR1P17181 557 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 ICAM3P32942 547 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 RCAN1P53805 252 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 SMAD4Q13485 552 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 SHHQ15465 462 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 ME3Q16798 604 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 CELF3Q5SZQ8 465 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 JAKMIP3Q5VZ66 844 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 FAM109BQ6ICB4 259 aaPredicted RBP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 DCP2Q8IU60 420 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 SAMD3Q8N6K7 520 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 LINC00482Q8N8I6 264 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 NECAB1Q8N987 351 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 BTN2A2Q8WVV5 523 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 CRYGNQ8WXF5 182 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 GJA10Q969M2 543 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 ZNF274Q96GC6 653 aaPredicted RBP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 SYT3Q9BQG1 590 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 GORASP1Q9BQQ3 440 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 C16orf70Q9BSU1 422 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 SLC26A6Q9BXS9 759 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 WNT8AQ9H1J5 351 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 ALDH8A1Q9H2A2 487 aaPredicted RBP5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 NKX2-4Q9H2Z4 354 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 SPC25Q9HBM1 224 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 VPS54Q9P1Q0 977 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 UBIAD1Q9Y5Z9 338 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 DUSP10Q9Y6W6 482 aa5.47□□□□□ -1.53
EXOSC3-204ENST00000465860 PRUNE2Q8WUY3 3088 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 IGLV3-22A0A075B6J6 115 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 GSTTP1A0A1W2PQM5 241 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 FAM86B1E9PN63 330 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 HAS3O00219 553 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 ARNTLO00327 626 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 SMAD7O15105 426 aaKnown RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 TBX1O43435 398 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 PFKFB2O60825 505 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 TIMP1P01033 207 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 FAM86B2P0C5J1 330 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 CSF2RAP15509 400 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 SARSP49591 514 aaKnown RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 CPT1AP50416 773 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 ADCY7P51828 1080 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 CCL23P55773 120 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 ANAPC15P60006 121 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 SP4Q02446 784 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 EFEMP1Q12805 493 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 ITGB3BPQ13352 177 aaPredicted RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 GPNMBQ14956 572 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 TCTN1Q2MV58 587 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 EARS2Q5JPH6 523 aaKnown RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 UBXN11Q5T124 520 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 C6orf15Q6UXA7 325 aaPredicted RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 Q7L0L9 218 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 DHX37Q8IY37 1157 aaKnown RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 TDHQ8IZJ6 230 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 PPTC7Q8NI37 304 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 DDX1Q92499 740 aaKnown RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 CUL5Q93034 780 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 ZBTB10Q96DT7 871 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 SCLYQ96I15 445 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 SPATA33Q96N06 139 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 PCYT2Q99447 389 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 MTG1Q9BT17 334 aaPredicted RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 ALG1Q9BT22 464 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 RNF26Q9BY78 433 aaPredicted RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 ANO3Q9BYT9 981 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 ZMYND12Q9H0C1 365 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 NTMQ9P121 344 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 HDAC6Q9UBN7 1215 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 TMEFF2Q9UIK5 374 aaPredicted RBP5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 KCNJ14Q9UNX9 436 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 UNC80Q8N2C7 3258 aa5.46□□□□□ -1.54
EXOSC3-204ENST00000465860 MICAL3Q7RTP6 2002 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 ESYT2A0FGR8 921 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 B2RBV5 119 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 B4DLN1 442 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 C22orf46C9J442 243 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 hCG_1984214I3L0E3 225 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 FIBPO43427 364 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 JAK2O60674 1132 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 CABYRO75952 493 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 CCNE2O96020 404 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 F2P00734 622 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 LGALS2P05162 132 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 ADRB1P08588 477 aa5.45□□□□□ -1.54
EXOSC3-204ENST00000465860 TGFB3P10600 412 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms