RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 BCO2Q9BYV7 579 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 RHOBTB2Q9BYZ6 727 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 DHX33Q9H6R0 707 aaKnown RBP14.88□□□□□ -0.03
HDAC6-215ENST00000465457 MYO1AQ9UBC5 1043 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 COL4A2P08572 1712 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 VWA8A3KMH1 1905 aa14.88□□□□□ -0.03
HDAC6-215ENST00000465457 PRR5-ARHGAP8B1AHC4 643 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 EIF3CLB5ME19 914 aaKnown RBP14.87□□□□□ -0.03
HDAC6-215ENST00000465457 RNF225M0QZC1 329 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-215ENST00000465457 CLIC2O15247 247 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 SLC16A4O15374 487 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 NDUFA10O95299 355 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 RPL17P18621 184 aaKnown RBP14.87□□□□□ -0.03
HDAC6-215ENST00000465457 KCNA4P22459 653 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 ANXA13P27216 316 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 GLUD2P49448 558 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 CYP2J2P51589 502 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 MCCD1P59942 119 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-215ENST00000465457 ARHGAP8P85298 464 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 CETN1Q12798 172 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 BFSP1Q12934 665 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 EXOC3L4Q17RC7 722 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 TCERG1LQ5VWI1 586 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 PDXDC1Q6P996 788 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 ZNF662Q6ZS27 426 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 TCP11Q8WWU5 503 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 ATRIPQ8WXE1 791 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 EIF3CQ99613 913 aaKnown RBP14.87□□□□□ -0.03
HDAC6-215ENST00000465457 GCOM2Q9BZD3 368 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-215ENST00000465457 POLR3FQ9H1D9 316 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-215ENST00000465457 PIDD1Q9HB75 910 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 LTB4R2Q9NPC1 389 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 XPNPEP1Q9NQW7 623 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 CHST12Q9NRB3 414 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 AGPAT5Q9NUQ2 364 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 ZSCAN32Q9NX65 697 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 FAN1Q9Y2M0 1017 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 PCDHB2Q9Y5E7 798 aa14.87□□□□□ -0.03
HDAC6-215ENST00000465457 EPN1Q9Y6I3 576 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-215ENST00000465457 SSU72P8A0A1W2PR75 194 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 FAM170BA6NMN3 283 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 PMM2O15305 246 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 TGM5O43548 720 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 KIF5CO60282 957 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 PAPLNO95428 1278 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 SDHBP21912 280 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 GARTP22102 1010 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 TARSP26639 723 aaKnown RBP14.86□□□□□ -0.03
HDAC6-215ENST00000465457 KLK7P49862 253 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 KCNMA1Q12791 1236 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 TARBP2Q15633 366 aaKnown RBP14.86□□□□□ -0.03
HDAC6-215ENST00000465457 ARHGAP29Q52LW3 1261 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 EHBP1Q8NDI1 1231 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 MYRIPQ8NFW9 859 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 BAP1Q92560 729 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 CCDC42Q96M95 316 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 KXD1Q9BQD3 176 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 RSAD1Q9HA92 442 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 RXFP1Q9HBX9 757 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 KIAA1586Q9HCI6 787 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 POLD4Q9HCU8 107 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 LUC7LQ9NQ29 371 aaKnown RBP14.86□□□□□ -0.03
HDAC6-215ENST00000465457 GPRC5CQ9NQ84 441 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 ARHGAP28Q9P2N2 729 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 BZW2Q9Y6E2 419 aaKnown RBP14.86□□□□□ -0.03
HDAC6-215ENST00000465457 SDK1Q7Z5N4 2213 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 IGF2RP11717 2491 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 TICRRQ7Z2Z1 1910 aa14.86□□□□□ -0.03
HDAC6-215ENST00000465457 SHISA7A6NL88 538 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 ZNF623O75123 536 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 MAFO75444 373 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-215ENST00000465457 ARL2P36404 184 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 CASP4P49662 377 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 EFNA5P52803 228 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 STRN3Q13033 797 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 SPA17Q15506 151 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 UBXN11Q5T124 520 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 SFMBT2Q5VUG0 894 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 WDR59Q6PJI9 974 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 RRAGAQ7L523 313 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 CATSPER4Q7RTX7 472 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 GRASPQ7Z6J2 395 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-215ENST00000465457 GPR161Q8N6U8 529 aaKnown RBP14.85□□□□□ -0.03
HDAC6-215ENST00000465457 DEPTORQ8TB45 409 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 URGCPQ8TCY9 931 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 NLRP4Q96MN2 994 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 TMEM175Q9BSA9 504 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 PRKD2Q9BZL6 878 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 TSGA10Q9BZW7 698 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 GANQ9H2C0 597 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 HAUS4Q9H6D7 363 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 PRMT8Q9NR22 394 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-215ENST00000465457 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.85□□□□□ -0.03
HDAC6-215ENST00000465457 HSPBP1Q9NZL4 362 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 CACNG4Q9UBN1 327 aa14.85□□□□□ -0.03
HDAC6-215ENST00000465457 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-215ENST00000465457 LRRC53A6NM62 1247 aa14.84□□□□□ -0.03
HDAC6-215ENST00000465457 GDF9O60383 454 aa14.84□□□□□ -0.03
HDAC6-215ENST00000465457 PIGRP01833 764 aa14.84□□□□□ -0.03
HDAC6-215ENST00000465457 SERPING1P05155 500 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms