RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 TASP1Q9H6P5 420 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 PRMT8Q9NR22 394 aaPredicted RBP22.49■■□□□ 1.19
CSPG5-204ENST00000465441 TMLHEQ9NVH6 421 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 TICRRQ7Z2Z1 1910 aa22.49■■□□□ 1.19
CSPG5-204ENST00000465441 STX6O43752 255 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 LILRB5O75023 590 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 ITGB3P05106 788 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 POLR2BP30876 1174 aaKnown RBP22.48■■□□□ 1.19
CSPG5-204ENST00000465441 ALCAMQ13740 583 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 C1orf127Q8N9H9 656 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 CACTINQ8WUQ7 758 aaKnown RBP22.48■■□□□ 1.19
CSPG5-204ENST00000465441 ZNF560Q96MR9 790 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 CBWD1Q9BRT8 395 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 BACH2Q9BYV9 841 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 OBP2AQ9NY56 170 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 ABI2Q9NYB9 513 aaPredicted RBP22.48■■□□□ 1.19
CSPG5-204ENST00000465441 RBAKQ9NYW8 714 aaPredicted RBP22.48■■□□□ 1.19
CSPG5-204ENST00000465441 COL4A2P08572 1712 aa22.48■■□□□ 1.19
CSPG5-204ENST00000465441 EXTL3O43909 919 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 WEE1P30291 646 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 CDC25CP30307 473 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 PNPLA4P41247 253 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 SOX9P48436 509 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 NASPP49321 788 aaPredicted RBP22.47■■□□□ 1.19
CSPG5-204ENST00000465441 KPNA1P52294 538 aaPredicted RBP22.47■■□□□ 1.19
CSPG5-204ENST00000465441 FOXK2Q01167 660 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 TAF12Q16514 161 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 CSGALNACT2Q8N6G5 542 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 LINC00301Q8NCQ3 95 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 TTC8Q8TAM2 541 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 ZFYVE19Q96K21 471 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 FAM84AQ96KN4 292 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 SLC46A2Q9BY10 475 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 C8orf33Q9H7E9 229 aaPredicted RBP22.47■■□□□ 1.19
CSPG5-204ENST00000465441 TMEM206Q9H813 350 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 PCDHB5Q9Y5E4 795 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 TSC2P49815 1807 aa22.47■■□□□ 1.19
CSPG5-204ENST00000465441 EP300Q09472 2414 aaPredicted RBP22.46■■□□□ 1.19
CSPG5-204ENST00000465441 SLC38A8A6NNN8 435 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 STK38Q15208 465 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 ARHGAP29Q52LW3 1261 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 CCDC65Q8IXS2 484 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 PDCL2Q8N4E4 241 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 CXorf38Q8TB03 319 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 NOC3LQ8WTT2 800 aaKnown RBP22.46■■□□□ 1.19
CSPG5-204ENST00000465441 MSANTD3Q96H12 275 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 PDE11AQ9HCR9 933 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 GTSE1Q9NYZ3 720 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 TFIP11Q9UBB9 837 aaKnown RBP22.46■■□□□ 1.19
CSPG5-204ENST00000465441 L1RE1Q9UN81 338 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 TCHHQ07283 1943 aa22.46■■□□□ 1.19
CSPG5-204ENST00000465441 MYBPHLA2RUH7 354 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 K7ELQ4 463 aaPredicted RBP22.45■■□□□ 1.18
CSPG5-204ENST00000465441 PRAMEF12O95522 483 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 TDGF1P13385 188 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 GAS6Q14393 721 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 TXNDC11Q6PKC3 985 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 BPIFB1Q8TDL5 484 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 RMDN1Q96DB5 314 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 ACBD6Q9BR61 282 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 IER2Q9BTL4 223 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 PI4K2AQ9BTU6 479 aa22.45■■□□□ 1.18
CSPG5-204ENST00000465441 FAM126AQ9BYI3 521 aaPredicted RBP22.45■■□□□ 1.18
CSPG5-204ENST00000465441 DDX43Q9NXZ2 648 aaKnown RBP22.45■■□□□ 1.18
CSPG5-204ENST00000465441 SPECC1L-ADORA2AF8WAN1 911 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 HUS1O60921 280 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 PRPF40AO75400 957 aaKnown RBP22.44■■□□□ 1.18
CSPG5-204ENST00000465441 F11P03951 625 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 KRT19P08727 400 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 HMGA1P17096 107 aaKnown RBP22.44■■□□□ 1.18
CSPG5-204ENST00000465441 GPR15P49685 360 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 RBP5P82980 135 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 TSPY1Q01534 308 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 BFSP1Q12934 665 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 WDR44Q5JSH3 913 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 C1orf228Q6PIY5 440 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 ERMP1Q7Z2K6 904 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 TMEM150AQ86TG1 271 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 GPD1LQ8N335 351 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 LRRC52Q8N7C0 313 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 GLIS3Q8NEA6 775 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 HPS3Q969F9 1004 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 GCNAQ96QF7 691 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 SMG9Q9H0W8 520 aaKnown RBP22.44■■□□□ 1.18
CSPG5-204ENST00000465441 EPC1Q9H2F5 836 aa22.44■■□□□ 1.18
CSPG5-204ENST00000465441 RBM12Q9NTZ6 932 aaKnown RBP22.44■■□□□ 1.18
CSPG5-204ENST00000465441 GVINP1Q7Z2Y8 2422 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 SPTLC2O15270 562 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 PPP6R2O75170 966 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 ACAT1P24752 427 aaKnown RBP22.43■■□□□ 1.18
CSPG5-204ENST00000465441 CXCL12P48061 93 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 CCR3P51677 355 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 NRLP54845 237 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 NFE2Q16621 373 aaPredicted RBP22.43■■□□□ 1.18
CSPG5-204ENST00000465441 SDHAF4Q5VUM1 108 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 OSTM1Q86WC4 334 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 RALGPS2Q86X27 583 aaPredicted RBP22.43■■□□□ 1.18
CSPG5-204ENST00000465441 CMTM8Q8IZV2 173 aa22.43■■□□□ 1.18
CSPG5-204ENST00000465441 CELF5Q8N6W0 485 aaKnown RBP22.43■■□□□ 1.18
CSPG5-204ENST00000465441 TNMDQ9H2S6 317 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms