RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LMAN2Q12907 356 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 GPR17Q13304 367 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-214ENST00000465269 CALCRLQ16602 461 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 C2orf27AQ580R0 203 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 CATSPER3Q86XQ3 398 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 MARCH9Q86YJ5 346 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 CMTM8Q8IZV2 173 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 DEFB119Q8N690 84 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 ZBTB45Q96K62 511 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-214ENST00000465269 SEPT5Q99719 369 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-214ENST00000465269 ACO2Q99798 780 aaKnown RBP16.31■□□□□ 0.2
HDAC6-214ENST00000465269 TARS2Q9BW92 718 aaKnown RBP16.31■□□□□ 0.2
HDAC6-214ENST00000465269 CCDC86Q9H6F5 360 aaKnown RBP16.31■□□□□ 0.2
HDAC6-214ENST00000465269 CNTN3Q9P232 1028 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 TBX20Q9UMR3 447 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 TNFSF13BQ9Y275 285 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 CITO14578 2027 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 PTPRDP23468 1912 aa16.31■□□□□ 0.2
HDAC6-214ENST00000465269 TNRC6BQ9UPQ9 1833 aaKnown RBP16.31■□□□□ 0.2
HDAC6-214ENST00000465269 CYP11B2P19099 503 aa16.3■□□□□ 0.2
HDAC6-214ENST00000465269 TMEM150AQ86TG1 271 aa16.3■□□□□ 0.2
HDAC6-214ENST00000465269 SFTPA1Q8IWL2 248 aa16.3■□□□□ 0.2
HDAC6-214ENST00000465269 ACAP3Q96P50 834 aa16.3■□□□□ 0.2
HDAC6-214ENST00000465269 PTPRHQ9HD43 1115 aa16.3■□□□□ 0.2
HDAC6-214ENST00000465269 ASB3Q9Y575 518 aa16.3■□□□□ 0.2
HDAC6-214ENST00000465269 ZNF638Q14966 1978 aaKnown RBP16.29■□□□□ 0.2
HDAC6-214ENST00000465269 H0Y626 953 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 K7ERI5 159 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 M0QZQ0 153 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 ABLIM1O14639 778 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 PPEF2O14830 753 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 TRIM16O95361 564 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 XRCC6P12956 609 aaKnown RBP eCLIP16.29■□□□□ 0.2
HDAC6-214ENST00000465269 ITPKAP23677 461 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 WEE1P30291 646 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 EVCP57679 992 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 BFSP1Q12934 665 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 TXNDC8Q6A555 127 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 TAS1R3Q7RTX0 852 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 RASSF3Q86WH2 238 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 FBXL16Q8N461 479 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 KCNB2Q92953 911 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 CD101Q93033 1021 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 ACDQ96AP0 544 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 ZDHHC4Q9NPG8 344 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 CACNA2D2Q9NY47 1150 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 WNT6Q9Y6F9 365 aa16.29■□□□□ 0.2
HDAC6-214ENST00000465269 ARHGEF35A5YM69 484 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 CD59P13987 128 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 AVPR1AP37288 418 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 EFNA5P52803 228 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 SLC10A6Q3KNW5 377 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 MGAT5BQ3V5L5 792 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 FBXO43Q4G163 708 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 TMEM92Q6UXU6 159 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 USP37Q86T82 979 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 ITIH5Q86UX2 942 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 SYT12Q8IV01 421 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 GLIS3Q8NEA6 775 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 OR10T2Q8NGX3 314 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 USP33Q8TEY7 942 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 CNOT6LQ96LI5 555 aaKnown RBP16.28■□□□□ 0.2
HDAC6-214ENST00000465269 GCNAQ96QF7 691 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 TMEM60Q9H2L4 133 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 ECT2Q9H8V3 914 aa16.28■□□□□ 0.2
HDAC6-214ENST00000465269 OR6C75A6NL08 312 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 CCDC169A6NNP5 214 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 MAP3K13O43283 966 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 SH3BP5O60239 455 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 C1QL1O75973 258 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 CDC25CP30307 473 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 ATXN3P54252 364 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-214ENST00000465269 ZNF423Q2M1K9 1284 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 SLC39A12Q504Y0 691 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 OVOS1Q6IE37 1185 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 CC2D1AQ6P1N0 951 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-214ENST00000465269 DSTYKQ6XUX3 929 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 CCNI2Q6ZMN8 369 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-214ENST00000465269 LPCAT2Q7L5N7 544 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 HDDC3Q8N4P3 179 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 IFT74Q96LB3 600 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 NACC1Q96RE7 527 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 NAP1L4Q99733 375 aaKnown RBP16.27■□□□□ 0.2
HDAC6-214ENST00000465269 TDP1Q9NUW8 608 aa16.27■□□□□ 0.2
HDAC6-214ENST00000465269 UPK3BL1B0FP48 263 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 UPK3BL2E5RIL1 263 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 K7EQS6 105 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 TNFRSF10BO14763 440 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 FGF19O95750 216 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 FTH1P19P0C7X4 201 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 CXCL8P10145 99 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 RDXP35241 583 aaKnown RBP16.26■□□□□ 0.19
HDAC6-214ENST00000465269 P2RY2P41231 377 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 PPP2R5AQ15172 486 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 SLC23A3Q6PIS1 610 aa16.26■□□□□ 0.19
HDAC6-214ENST00000465269 APBB1IPQ7Z5R6 666 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-214ENST00000465269 C11orf74Q86VG3 221 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms