RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 CUEDC2Q9H467 287 aa16.05■□□□□ 0.16
MRPL55-225ENST00000465268 BRD9Q9H8M2 597 aa16.05■□□□□ 0.16
MRPL55-225ENST00000465268 ABI2Q9NYB9 513 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-225ENST00000465268 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
MRPL55-225ENST00000465268 HSFX1Q9UBD0 423 aa16.05■□□□□ 0.16
MRPL55-225ENST00000465268 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
MRPL55-225ENST00000465268 SCN1AP35498 2009 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 MYH15Q9Y2K3 1946 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 CLIC2O15247 247 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 KRT19P08727 400 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 CUL4BQ13620 913 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 FAM26FQ5R3K3 315 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 GPR158Q5T848 1215 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 ARID3BQ8IVW6 561 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-225ENST00000465268 MFSD6LQ8IWD5 586 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 NELFCDQ8IXH7 590 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 RDH13Q8NBN7 331 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 FAM200AQ8TCP9 573 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 DNASE1L2Q92874 299 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 NKD2Q969F2 451 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-225ENST00000465268 CLDN23Q96B33 292 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 ZNF560Q96MR9 790 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 PI4K2AQ9BTU6 479 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 SMG9Q9H0W8 520 aaKnown RBP16.04■□□□□ 0.16
MRPL55-225ENST00000465268 GZF1Q9H116 711 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-225ENST00000465268 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 INTS13Q9NVM9 706 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 ITGA11Q9UKX5 1188 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 ASB3Q9Y575 518 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 SNX9Q9Y5X1 595 aa16.04■□□□□ 0.16
MRPL55-225ENST00000465268 TSC2P49815 1807 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 EIF3DO15371 548 aaKnown RBP eCLIP16.03■□□□□ 0.16
MRPL55-225ENST00000465268 PRAMEF12O95522 483 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
MRPL55-225ENST00000465268 HMGA1P17096 107 aaKnown RBP16.03■□□□□ 0.16
MRPL55-225ENST00000465268 PNPLA4P41247 253 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 AFMP43652 599 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 ME1P48163 572 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 SOX9P48436 509 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 TUFMP49411 452 aaKnown RBP16.03■□□□□ 0.16
MRPL55-225ENST00000465268 RBP5P82980 135 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 SOWAHAQ2M3V2 549 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 WDR44Q5JSH3 913 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 ZNF852Q6ZMS4 543 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 UNC13DQ70J99 1090 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 LRRC52Q8N7C0 313 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 TTC8Q8TAM2 541 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 KCNG4Q8TDN1 519 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 CACTINQ8WUQ7 758 aaKnown RBP16.03■□□□□ 0.16
MRPL55-225ENST00000465268 ZFYVE19Q96K21 471 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 SLC46A2Q9BY10 475 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 OSBPL6Q9BZF3 934 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 LRRC27Q9C0I9 530 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 SLC39A2Q9NP94 309 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 SPATA6Q9NWH7 488 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-225ENST00000465268 GDAP2Q9NXN4 497 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 DDX43Q9NXZ2 648 aaKnown RBP16.03■□□□□ 0.16
MRPL55-225ENST00000465268 SERTAD1Q9UHV2 236 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 RCOR1Q9UKL0 485 aa16.03■□□□□ 0.16
MRPL55-225ENST00000465268 NDRG2Q9UN36 371 aaKnown RBP16.03■□□□□ 0.16
MRPL55-225ENST00000465268 ANK1P16157 1881 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 ZNF233A6NK53 670 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 GABRDO14764 452 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 ZNF263O14978 683 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 ATP2C2O75185 946 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 CST3P01034 146 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-225ENST00000465268 TMEM191BP0C7N4 346 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 CYP2F1P24903 491 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 AMPD3Q01432 767 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 DDR2Q16832 855 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 TSSK4Q6SA08 328 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 LIMS2Q7Z4I7 341 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 DCP1BQ8IZD4 617 aaKnown RBP16.02■□□□□ 0.16
MRPL55-225ENST00000465268 ADSSL1Q8N142 457 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 SPPL2BQ8TCT7 592 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 DEPDC1BQ8WUY9 529 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 KBTBD7Q8WVZ9 684 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 IRF7Q92985 503 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 BCO2Q9BYV7 579 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 GPR88Q9GZN0 384 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 GTF3C4Q9UKN8 822 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 NME7Q9Y5B8 376 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 PCDHB5Q9Y5E4 795 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 PIAS3Q9Y6X2 628 aa16.02■□□□□ 0.16
MRPL55-225ENST00000465268 MYBPHLA2RUH7 354 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 ACTN4O43707 911 aaKnown RBP16.01■□□□□ 0.15
MRPL55-225ENST00000465268 KLRC4O43908 158 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 HUS1O60921 280 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 PRPF40AO75400 957 aaKnown RBP16.01■□□□□ 0.15
MRPL55-225ENST00000465268 F11P03951 625 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 LMO2P25791 158 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 CYP2J2P51589 502 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 FCHO2Q0JRZ9 810 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 INTS6LQ5JSJ4 861 aaKnown RBP16.01■□□□□ 0.15
MRPL55-225ENST00000465268 ITIH5Q86UX2 942 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 ADGRF2Q8IZF7 708 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 RIN3Q8TB24 985 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 PLEKHO2Q8TD55 490 aa16.01■□□□□ 0.15
MRPL55-225ENST00000465268 C2orf15Q8WU43 125 aaKnown RBP16.01■□□□□ 0.15
MRPL55-225ENST00000465268 ZNF516Q92618 1163 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms