RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 CISHQ9NSE2 258 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 PCDHB8Q9UN66 801 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 MRFAP1Q9Y605 127 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 SF3B1O75533 1304 aaKnown RBP eCLIP18.05■□□□□ 0.482e-7■■■■■ 129.2
EXOSC3-203ENST00000465229 A0A0U1RQJ8 604 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 FOXN3O00409 490 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 FGF18O76093 207 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 CYP11A1P05108 521 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 FAM163BP0C2L3 166 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 ODC1P11926 461 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 CD58P19256 250 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 JAM2P57087 298 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 TAP1Q03518 808 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 ELAVL2Q12926 359 aaKnown RBP18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 RAB30Q15771 203 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 FAM171A1Q5VUB5 890 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 RNF168Q8IYW5 571 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 TXLNBQ8N3L3 684 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 KLHL23Q8NBE8 558 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 ATRIPQ8WXE1 791 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 SHC3Q92529 594 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 IRX2Q9BZI1 471 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 AIPL1Q9NZN9 384 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 RWDD3Q9Y3V2 267 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 CTAGE9A4FU28 777 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 SYN3O14994 580 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 SERPING1P05155 500 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 TYMPP19971 482 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 FGFR3P22607 806 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 TKTP29401 623 aaKnown RBP18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 CTNNB1P35222 781 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 VAV2P52735 878 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 ASTE1Q2TB18 679 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 SFMBT2Q5VUG0 894 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 HGSNATQ68CP4 663 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 KIAA1328Q86T90 577 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 OSTM1Q86WC4 334 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 ADGRF2Q8IZF7 708 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 TMEM86AQ8N2M4 240 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 B3GALT6Q96L58 329 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 PLVAPQ9BX97 442 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 NKX2-4Q9H2Z4 354 aa18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 BARX2Q9UMQ3 279 aaPredicted RBP18.04■□□□□ 0.48
EXOSC3-203ENST00000465229 F8VZ95 297 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 GABRDO14764 452 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 PNMA6AP0CW24 399 aaPredicted RBP18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 WARSP23381 471 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 EIF4A3P38919 411 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 KIF11P52732 1056 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 PLCB3Q01970 1234 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 INCA1Q0VD86 236 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 DDX53Q86TM3 631 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 WHAMMQ8TF30 809 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 SPAG5Q96R06 1193 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 TGS1Q96RS0 853 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 NAPGQ99747 312 aaPredicted RBP18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 FAM124BQ9H5Z6 455 aaPredicted RBP18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 DSEQ9UL01 958 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 MTUS1Q9ULD2 1270 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 CNTN6Q9UQ52 1028 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 COLQQ9Y215 455 aaPredicted RBP18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 NME7Q9Y5B8 376 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 PCDHB4Q9Y5E5 795 aa18.03■□□□□ 0.48
EXOSC3-203ENST00000465229 ARHGEF37A1IGU5 675 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 C5orf67F2Z3F1 127 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 CILPO75339 1184 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 LMO2P25791 158 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 GNL1P36915 607 aaPredicted RBP18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 NDST1P52848 882 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 ERVK-21P61565 698 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 YWHAEP62258 255 aaKnown RBP18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 SMAD3P84022 425 aaKnown RBP18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 KRT17Q04695 432 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 CCDC122Q5T0U0 273 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 TMEM270Q6UE05 265 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 CEP57Q86XR8 500 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 FAM71AQ8IYT1 594 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 SLC35F6Q8N357 371 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 OR6B3Q8NGW1 331 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 DEF6Q9H4E7 631 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 CHST7Q9NS84 486 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 HMGXB4Q9UGU5 601 aa18.02■□□□□ 0.48
EXOSC3-203ENST00000465229 EFCAB8A8MWE9 144 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 HCRTO43612 131 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 OAZ2O95190 189 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 SOD2P04179 222 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 RB1P06400 928 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 ANXA13P27216 316 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 STAT1P42224 750 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 LHX1P48742 406 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 KIF5AQ12840 1032 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 MRPL58Q14197 206 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 USP41Q3LFD5 358 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 RTP2Q5QGT7 225 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 OVOS1Q6IE37 1185 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 METTL23Q86XA0 190 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 TTC39CQ8N584 583 aa18.01■□□□□ 0.47
EXOSC3-203ENST00000465229 MNS1Q8NEH6 495 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms