RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CFAP54Q96N23 3096 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 RIF1Q5UIP0 2472 aaKnown RBP18.75■□□□□ 0.59
CPSF4-209ENST00000465132 TRAPPC3O43617 180 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 PHACTR2O75167 634 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 C8AP07357 584 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 HOXA9P31269 272 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 MCCD1P59942 119 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-209ENST00000465132 CLDN10P78369 228 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 NTHL1P78549 312 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 PDXDC1Q6P996 788 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-209ENST00000465132 AOPEPQ8N6M6 819 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 CNOT6LQ96LI5 555 aaKnown RBP18.75■□□□□ 0.59
CPSF4-209ENST00000465132 INTS13Q9NVM9 706 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 DPP3Q9NY33 737 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 CDH7Q9ULB5 785 aa18.75■□□□□ 0.59
CPSF4-209ENST00000465132 RBP5P82980 135 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 MYO1EQ12965 1108 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 TRPC3Q13507 836 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 ZBTB6Q15916 424 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 DCAF17Q5H9S7 520 aaPredicted RBP18.74■□□□□ 0.59
CPSF4-209ENST00000465132 DCLRE1AQ6PJP8 1040 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 PARM1Q6UWI2 310 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 FGF14Q92915 247 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 ZNF560Q96MR9 790 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 RPP25Q9BUL9 199 aaKnown RBP18.74■□□□□ 0.59
CPSF4-209ENST00000465132 IMPG2Q9BZV3 1241 aa18.74■□□□□ 0.59
CPSF4-209ENST00000465132 FAM186AA6NE01 2351 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 KCNJ18B7U540 433 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 TMEM189-UBE2V1I3L0A0 370 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 P4HA2O15460 535 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 CCL16O15467 120 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 XYLBO75191 536 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 FGFR3P22607 806 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 IGFBP6P24592 240 aaPredicted RBP18.73■□□□□ 0.59
CPSF4-209ENST00000465132 LRPAP1P30533 357 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 OR1D2P34982 312 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 BIRC3Q13489 604 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 RAB33AQ14088 237 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 KCNJ12Q14500 433 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 TCP11X2Q5H9J9 407 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 GLRA4Q5JXX5 417 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 KRT39Q6A163 491 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 SLC7A14Q8TBB6 771 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 FGF13Q92913 245 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 EEF2KMTQ96G04 330 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 TMEM8AQ9HCN3 771 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 FANCLQ9NW38 375 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 DLGAP2Q9P1A6 1054 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 MTRRQ9UBK8 725 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 POLIQ9UNA4 740 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 SIT1Q9Y3P8 196 aa18.73■□□□□ 0.59
CPSF4-209ENST00000465132 B3GAT3O94766 335 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 DCNP07585 359 aaKnown RBP18.72■□□□□ 0.59
CPSF4-209ENST00000465132 NFICP08651 508 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 POU2F2P09086 479 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 GPC5P78333 572 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 MAN2A1Q16706 1144 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 UVSSAQ2YD98 709 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 FILIP1LQ4L180 1135 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 CDKAL1Q5VV42 579 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 CD300LGQ6UXG3 332 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 TRIM59Q8IWR1 403 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 LRRC52Q8N7C0 313 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 ZSWIM2Q8NEG5 633 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 ITFG1Q8TB96 612 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 TAF4BQ92750 862 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 BORCS6Q96GS4 357 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 ZMAT2Q96NC0 199 aaKnown RBP18.72■□□□□ 0.59
CPSF4-209ENST00000465132 CBX8Q9HC52 389 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 NUB1Q9Y5A7 615 aa18.72■□□□□ 0.59
CPSF4-209ENST00000465132 LRRIQ3A6PVS8 624 aaPredicted RBP18.71■□□□□ 0.59
CPSF4-209ENST00000465132 PMM2O15305 246 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 AFPP02771 609 aaKnown RBP18.71■□□□□ 0.59
CPSF4-209ENST00000465132 TPM3P06753 285 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 P4HA1P13674 534 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 ATICP31939 592 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 MXI1P50539 228 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 CLCNKBP51801 687 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 STARD6P59095 220 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 FOXK2Q01167 660 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 UPP1Q16831 310 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 SV2CQ496J9 727 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 RSPO2Q6UXX9 243 aaPredicted RBP18.71■□□□□ 0.59
CPSF4-209ENST00000465132 MTSS1LQ765P7 747 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 TRAPPC11Q7Z392 1133 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 MED15Q96RN5 788 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 TUBGCP2Q9BSJ2 902 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 MTMR12Q9C0I1 747 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 DNAI2Q9GZS0 605 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 SEMA4AQ9H3S1 761 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 SAMSN1Q9NSI8 373 aaKnown RBP18.71■□□□□ 0.59
CPSF4-209ENST00000465132 CDY1Q9Y6F8 540 aa18.71■□□□□ 0.59
CPSF4-209ENST00000465132 PODXLO00592 558 aa18.7■□□□□ 0.58
CPSF4-209ENST00000465132 KRT19P08727 400 aa18.7■□□□□ 0.58
CPSF4-209ENST00000465132 IQCB1Q15051 598 aa18.7■□□□□ 0.58
CPSF4-209ENST00000465132 FKBP15Q5T1M5 1219 aa18.7■□□□□ 0.58
CPSF4-209ENST00000465132 RTL10Q7L3V2 364 aa18.7■□□□□ 0.58
CPSF4-209ENST00000465132 DHX40Q8IX18 779 aaKnown RBP18.7■□□□□ 0.58
CPSF4-209ENST00000465132 EFCAB13Q8IY85 973 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms