RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 FSTL4Q6MZW2 842 aa10.35□□□□□ -0.75
APP-213ENST00000464867 SLC23A3Q6PIS1 610 aa10.35□□□□□ -0.75
APP-213ENST00000464867 FERMT3Q86UX7 667 aa10.35□□□□□ -0.75
APP-213ENST00000464867 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
APP-213ENST00000464867 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
APP-213ENST00000464867 MB21D2Q8IYB1 491 aaPredicted RBP10.35□□□□□ -0.75
APP-213ENST00000464867 RPLP0P6Q8NHW5 317 aa10.35□□□□□ -0.75
APP-213ENST00000464867 CCDC26Q8TAB7 109 aa10.35□□□□□ -0.75
APP-213ENST00000464867 SHKBP1Q8TBC3 707 aa10.35□□□□□ -0.75
APP-213ENST00000464867 BPIFB1Q8TDL5 484 aa10.35□□□□□ -0.75
APP-213ENST00000464867 CCDC12Q8WUD4 166 aaPredicted RBP10.35□□□□□ -0.75
APP-213ENST00000464867 SLC5A5Q92911 643 aa10.35□□□□□ -0.75
APP-213ENST00000464867 RSPRY1Q96DX4 576 aa10.35□□□□□ -0.75
APP-213ENST00000464867 CCDC136Q96JN2 1154 aa10.35□□□□□ -0.75
APP-213ENST00000464867 KIF2CQ99661 725 aa10.35□□□□□ -0.75
APP-213ENST00000464867 RBM28Q9NW13 759 aaKnown RBP10.35□□□□□ -0.75
APP-213ENST00000464867 ADAMTS9Q9P2N4 1935 aa10.35□□□□□ -0.75
APP-213ENST00000464867 TMEM189-UBE2V1I3L0A0 370 aa10.34□□□□□ -0.75
APP-213ENST00000464867 SH2B2O14492 632 aaPredicted RBP10.34□□□□□ -0.75
APP-213ENST00000464867 TNFRSF10BO14763 440 aa10.34□□□□□ -0.75
APP-213ENST00000464867 SEC24AO95486 1093 aa10.34□□□□□ -0.75
APP-213ENST00000464867 EGFP01133 1207 aa10.34□□□□□ -0.75
APP-213ENST00000464867 PRKCBP05771 671 aa10.34□□□□□ -0.75
APP-213ENST00000464867 GNA11P29992 359 aa10.34□□□□□ -0.75
APP-213ENST00000464867 LIFRP42702 1097 aa10.34□□□□□ -0.75
APP-213ENST00000464867 NPEPPSP55786 919 aa10.34□□□□□ -0.75
APP-213ENST00000464867 PSMD2Q13200 908 aa10.34□□□□□ -0.75
APP-213ENST00000464867 PLD1Q13393 1074 aa10.34□□□□□ -0.75
APP-213ENST00000464867 SV2AQ7L0J3 742 aa10.34□□□□□ -0.75
APP-213ENST00000464867 OTUD6AQ7L8S5 288 aa10.34□□□□□ -0.75
APP-213ENST00000464867 PNPLA1Q8N8W4 532 aa10.34□□□□□ -0.75
APP-213ENST00000464867 EXOC6Q8TAG9 804 aa10.34□□□□□ -0.75
APP-213ENST00000464867 CEP76Q8TAP6 659 aa10.34□□□□□ -0.75
APP-213ENST00000464867 PIP4K2CQ8TBX8 421 aa10.34□□□□□ -0.75
APP-213ENST00000464867 SPACA7Q96KW9 195 aa10.34□□□□□ -0.75
APP-213ENST00000464867 TPSD1Q9BZJ3 242 aa10.34□□□□□ -0.75
APP-213ENST00000464867 OSBPL3Q9H4L5 887 aa10.34□□□□□ -0.75
APP-213ENST00000464867 DHX33Q9H6R0 707 aaKnown RBP10.34□□□□□ -0.75
APP-213ENST00000464867 POLR3BQ9NW08 1133 aaPredicted RBP10.34□□□□□ -0.75
APP-213ENST00000464867 CEP72Q9P209 647 aa10.34□□□□□ -0.75
APP-213ENST00000464867 MBD1Q9UIS9 605 aaPredicted RBP10.34□□□□□ -0.75
APP-213ENST00000464867 SLC6A14Q9UN76 642 aa10.34□□□□□ -0.75
APP-213ENST00000464867 GOLGA4Q13439 2230 aaKnown RBP10.34□□□□□ -0.75
APP-213ENST00000464867 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
APP-213ENST00000464867 A0A1B0GUA9 196 aa10.33□□□□□ -0.76
APP-213ENST00000464867 TRAK2O60296 914 aa10.33□□□□□ -0.76
APP-213ENST00000464867 FGF19O95750 216 aa10.33□□□□□ -0.76
APP-213ENST00000464867 HOXD12P35452 270 aa10.33□□□□□ -0.76
APP-213ENST00000464867 QARSP47897 775 aaKnown RBP10.33□□□□□ -0.76
APP-213ENST00000464867 MCM2P49736 904 aa10.33□□□□□ -0.76
APP-213ENST00000464867 POU5F1BQ06416 359 aa10.33□□□□□ -0.76
APP-213ENST00000464867 CYP4F3Q08477 520 aa10.33□□□□□ -0.76
APP-213ENST00000464867 SLC14A1Q13336 389 aa10.33□□□□□ -0.76
APP-213ENST00000464867 EMC2Q15006 297 aa10.33□□□□□ -0.76
APP-213ENST00000464867 DUOXA1Q1HG43 343 aa10.33□□□□□ -0.76
APP-213ENST00000464867 ANO7Q6IWH7 933 aa10.33□□□□□ -0.76
APP-213ENST00000464867 ARMCX6Q7L4S7 300 aa10.33□□□□□ -0.76
APP-213ENST00000464867 RABEPKQ7Z6M1 372 aa10.33□□□□□ -0.76
APP-213ENST00000464867 CDR2LQ86X02 465 aaPredicted RBP10.33□□□□□ -0.76
APP-213ENST00000464867 BICD2Q8TD16 824 aa10.33□□□□□ -0.76
APP-213ENST00000464867 RUFY2Q8WXA3 655 aa10.33□□□□□ -0.76
APP-213ENST00000464867 LENG9Q96B70 501 aa10.33□□□□□ -0.76
APP-213ENST00000464867 CRELD1Q96HD1 420 aa10.33□□□□□ -0.76
APP-213ENST00000464867 UROC1Q96N76 676 aa10.33□□□□□ -0.76
APP-213ENST00000464867 P2RY13Q9BPV8 354 aa10.33□□□□□ -0.76
APP-213ENST00000464867 LNPKQ9C0E8 428 aa10.33□□□□□ -0.76
APP-213ENST00000464867 ATXN3LQ9H3M9 355 aa10.33□□□□□ -0.76
APP-213ENST00000464867 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
APP-213ENST00000464867 PTPRBP23467 1997 aa10.33□□□□□ -0.76
APP-213ENST00000464867 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
APP-213ENST00000464867 I3L4J1 428 aa10.32□□□□□ -0.76
APP-213ENST00000464867 PTGESO14684 152 aa10.32□□□□□ -0.76
APP-213ENST00000464867 PSMD10O75832 226 aa10.32□□□□□ -0.76
APP-213ENST00000464867 ALDH1A2O94788 518 aa10.32□□□□□ -0.76
APP-213ENST00000464867 NTRK1P04629 796 aa10.32□□□□□ -0.76
APP-213ENST00000464867 SYPP08247 313 aa10.32□□□□□ -0.76
APP-213ENST00000464867 BCKDHBP21953 392 aa10.32□□□□□ -0.76
APP-213ENST00000464867 USP11P51784 963 aa10.32□□□□□ -0.76
APP-213ENST00000464867 CLCNKBP51801 687 aa10.32□□□□□ -0.76
APP-213ENST00000464867 EPHB3P54753 998 aa10.32□□□□□ -0.76
APP-213ENST00000464867 CYP4A11Q02928 519 aa10.32□□□□□ -0.76
APP-213ENST00000464867 CFHR1Q03591 330 aa10.32□□□□□ -0.76
APP-213ENST00000464867 MBTD1Q05BQ5 628 aa10.32□□□□□ -0.76
APP-213ENST00000464867 RUNX3Q13761 415 aa10.32□□□□□ -0.76
APP-213ENST00000464867 BYSLQ13895 437 aaKnown RBP10.32□□□□□ -0.76
APP-213ENST00000464867 CTXN3Q4LDR2 81 aa10.32□□□□□ -0.76
APP-213ENST00000464867 GPR158Q5T848 1215 aa10.32□□□□□ -0.76
APP-213ENST00000464867 LYSMD4Q5XG99 296 aa10.32□□□□□ -0.76
APP-213ENST00000464867 LRRC69Q6ZNQ3 347 aa10.32□□□□□ -0.76
APP-213ENST00000464867 KRT25Q7Z3Z0 450 aa10.32□□□□□ -0.76
APP-213ENST00000464867 TTC30AQ86WT1 665 aa10.32□□□□□ -0.76
APP-213ENST00000464867 SLKQ9H2G2 1235 aaPredicted RBP10.32□□□□□ -0.76
APP-213ENST00000464867 GKN1Q9NS71 199 aa10.32□□□□□ -0.76
APP-213ENST00000464867 AFF4Q9UHB7 1163 aaKnown RBP10.32□□□□□ -0.76
APP-213ENST00000464867 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.31□□□□□ -0.76
APP-213ENST00000464867 ESYT2A0FGR8 921 aa10.31□□□□□ -0.76
APP-213ENST00000464867 SYN3O14994 580 aa10.31□□□□□ -0.76
APP-213ENST00000464867 B4GALT5O43286 388 aa10.31□□□□□ -0.76
APP-213ENST00000464867 SERPINF2P08697 491 aa10.31□□□□□ -0.76
APP-213ENST00000464867 CPB1P15086 417 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms