RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 MEA1Q16626 185 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 ZNF394Q53GI3 561 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 KIAA0319Q5VV43 1072 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 HGSNATQ68CP4 663 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 FUT10Q6P4F1 479 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 TMEM270Q6UE05 265 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 DSTYKQ6XUX3 929 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 IRF2BP2Q7Z5L9 587 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 NOP9Q86U38 636 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 SLC47A2Q86VL8 602 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 CNGA4Q8IV77 575 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 FIBCD1Q8N539 461 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 APPL2Q8NEU8 664 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 OR10T2Q8NGX3 314 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 FEZF2Q8TBJ5 459 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 SLC20A1Q8WUM9 679 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 ANP32BQ92688 251 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 IQCDQ96DY2 449 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 IGSF21Q96ID5 467 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 ZNF558Q96NG5 402 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 SPAG5Q96R06 1193 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 TGS1Q96RS0 853 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 CHP1Q99653 195 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 SYT11Q9BT88 431 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 CYP3A43Q9HB55 503 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 PCDHB8Q9UN66 801 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 LUC7L2Q9Y383 392 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 DAAM1Q9Y4D1 1078 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 PCDHB4Q9Y5E5 795 aa9.58□□□□□ -0.88
NUDCD3-204ENST00000464812 BDP1A6H8Y1 2624 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 FAM170AA1A519 330 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 H3BNC9 293 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 GABRDO14764 452 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 TACC1O75410 805 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 TADA2AO75478 443 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 ALDH2P05091 517 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 CFHP08603 1231 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 ODC1P11926 461 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 SKILP12757 684 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 P4HA1P13674 534 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 CHRNB2P17787 502 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 FGFR3P22607 806 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 WARSP23381 471 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 HNRNPH3P31942 346 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 SSTR3P32745 418 aaPredicted RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 BMPR1AP36894 532 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 USP8P40818 1118 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 STAT1P42224 750 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 CDR1P51861 262 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 NDST1P52848 882 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 MTF1Q14872 753 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 ASIC2Q16515 512 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 RTP2Q5QGT7 225 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 SPOUT1Q5T280 376 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 FAM171A1Q5VUB5 890 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 SFMBT2Q5VUG0 894 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 PALB2Q86YC2 1186 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 SLC4A11Q8NBS3 891 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 MAFAQ8NHW3 353 aaPredicted RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 TFAP2BQ92481 460 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 DDX1Q92499 740 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 JAKMIP2Q96AA8 810 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 FAXDC2Q96IV6 333 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 ZNF830Q96NB3 372 aaPredicted RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 PHF12Q96QT6 1004 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 PANX2Q96RD6 677 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 TMEM209Q96SK2 561 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 PKMYT1Q99640 499 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 COLEC11Q9BWP8 271 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 AIPL1Q9NZN9 384 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 ARHGAP20Q9P2F6 1191 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 NOCTQ9UK39 431 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 MYO6Q9UM54 1294 aa9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 BARX2Q9UMQ3 279 aaPredicted RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 R3HCC1Q9Y3T6 440 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 ZNF638Q14966 1978 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-204ENST00000464812 SF3B1O75533 1304 aaKnown RBP eCLIP9.56□□□□□ -0.883e-6■■■■■ 107.9
NUDCD3-204ENST00000464812 NCOR1O75376 2440 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 OBSL1O75147 1896 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 SOWAHDA6NJG2 315 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 HUS1O60921 280 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 ATP2C2O75185 946 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 TPM1P09493 284 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 PDGFRBP09619 1106 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 TYMPP19971 482 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 BRD2P25440 801 aaKnown RBP9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 CTNNB1P35222 781 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 GTF2F1P35269 517 aaKnown RBP eCLIP9.56□□□□□ -0.882e-8■■■■■ 30.8
NUDCD3-204ENST00000464812 ALDH7A1P49419 539 aaKnown RBP9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 GSDMDP57764 484 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 PSMC1P62191 440 aaKnown RBP9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 RBM10P98175 930 aaKnown RBP9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 PTK2Q05397 1052 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 CCDC85BQ15834 202 aaPredicted RBP9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 VARS2Q5ST30 1063 aaKnown RBP9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 TAF3Q5VWG9 929 aa9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 RSPO2Q6UXX9 243 aaPredicted RBP9.56□□□□□ -0.88
NUDCD3-204ENST00000464812 DPH6Q7L8W6 267 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms