RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 UNKLQ9H9P5 680 aaKnown RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 ZMAT3Q9HA38 289 aaKnown RBP5.1□□□□□ -1.59
CLK1-208ENST00000464454 ATP6V0A4Q9HBG4 840 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 INTS13Q9NVM9 706 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 CTTNBP2NLQ9P2B4 639 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 CPA4Q9UI42 421 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 DMTF1Q9Y222 760 aa5.1□□□□□ -1.59
CLK1-208ENST00000464454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.1□□□□□ -1.59
CLK1-208ENST00000464454 M0QYG6 137 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 AKAP8O43823 692 aaKnown RBP5.09□□□□□ -1.59
CLK1-208ENST00000464454 RHOBTB3O94955 611 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 MYF5P13349 255 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 SLC5A1P13866 664 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 AK2P54819 239 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 DPTQ07507 201 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 KLF10Q13118 480 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 DYRK1AQ13627 763 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 CRB2Q5IJ48 1285 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 FAM160B1Q5W0V3 765 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 LAIR1Q6GTX8 287 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 APOA5Q6Q788 366 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 MICALCLQ6ZW33 695 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 MRGPRGQ86SM5 289 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 USP37Q86T82 979 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 COL23A1Q86Y22 540 aaPredicted RBP5.09□□□□□ -1.59
CLK1-208ENST00000464454 KRT78Q8N1N4 520 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 POC1BQ8TC44 478 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 ASB10Q8WXI3 467 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 ANKS1AQ92625 1134 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 TMEM125Q96AQ2 219 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 PTCD3Q96EY7 689 aaKnown RBP5.09□□□□□ -1.59
CLK1-208ENST00000464454 SLC39A13Q96H72 371 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 TNIP3Q96KP6 325 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 MOGAT1Q96PD6 335 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 STRBPQ96SI9 672 aaKnown RBP5.09□□□□□ -1.59
CLK1-208ENST00000464454 C22orf23Q9BZE7 217 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 CASS4Q9NQ75 786 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 ETAA1Q9NY74 926 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 PHTF1Q9UMS5 762 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 PCDHA6Q9UN73 950 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 MED16Q9Y2X0 877 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 PLEKHM1Q9Y4G2 1056 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 PAXBP1Q9Y5B6 917 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 COMMD10Q9Y6G5 202 aa5.09□□□□□ -1.59
CLK1-208ENST00000464454 SPATA31A3Q5VYP0 1347 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 WDR33Q9C0J8 1336 aaKnown RBP5.08□□□□□ -1.6
CLK1-208ENST00000464454 ISM1B1AKI9 464 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 RAMP2O60895 175 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 SUN1O94901 812 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 THP07101 528 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 KITP10721 976 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 PIM1P11309 404 aaPredicted RBP5.08□□□□□ -1.6
CLK1-208ENST00000464454 RPL17P18621 184 aaKnown RBP5.08□□□□□ -1.6
CLK1-208ENST00000464454 TGFB2P61812 414 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 IFIT5Q13325 482 aaKnown RBP5.08□□□□□ -1.6
CLK1-208ENST00000464454 AMOTQ4VCS5 1084 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 Q6YL49 198 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 ZNF627Q7L945 461 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 PPP1R32Q7Z5V6 425 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 GPR149Q86SP6 731 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 LDLRAD3Q86YD5 345 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 LNX2Q8N448 690 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 PSD4Q8NDX1 1056 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 IL31RAQ8NI17 732 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 KBTBD7Q8WVZ9 684 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 SLC9A6Q92581 669 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 CAVIN3Q969G5 261 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 SUCLG2Q96I99 432 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 SORCS2Q96PQ0 1159 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 PSMD1Q99460 953 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 MYD88Q99836 296 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 ELAC2Q9BQ52 826 aaKnown RBP5.08□□□□□ -1.6
CLK1-208ENST00000464454 APOL5Q9BWW9 433 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 KIAA1586Q9HCI6 787 aa5.08□□□□□ -1.6
CLK1-208ENST00000464454 USP19O94966 1318 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 GRID2IPA4D2P6 1211 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 FOXN1O15353 648 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 TRIAP1O43715 76 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 ZFPL1O95159 310 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 KIF20AO95235 890 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 MYL3P08590 195 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 HDCP19113 662 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 ITGALP20701 1170 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 SLC7A1P30825 629 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 SATB1Q01826 763 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 SCAPQ12770 1279 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 MPP3Q13368 585 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 HECTD2Q5U5R9 776 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 TMPRSS9Q7Z410 1059 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 VRK3Q8IV63 474 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 ADGRG5Q8IZF4 528 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 PCSK9Q8NBP7 692 aaKnown RBP5.07□□□□□ -1.6
CLK1-208ENST00000464454 NSUN7Q8NE18 718 aaKnown RBP5.07□□□□□ -1.6
CLK1-208ENST00000464454 PARD3BQ8TEW8 1205 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 LINC00476Q8WZB0 136 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 PHKBQ93100 1093 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 MRGPRX1Q96LB2 322 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 TBCBQ99426 244 aa5.07□□□□□ -1.6
CLK1-208ENST00000464454 HEPHQ9BQS7 1158 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms