RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 POLR3BQ9NW08 1133 aaPredicted RBP15.69■□□□□ 0.1
SMC1A-204ENST00000463684 FRYQ5TBA9 3013 aa15.69■□□□□ 0.1
SMC1A-204ENST00000463684 GREB1Q4ZG55 1949 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 TMEM8BA6NDV4 472 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 H0YCG3 227 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 DCLK1O15075 740 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 APBB3O95704 486 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 DDX6P26196 483 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMC1A-204ENST00000463684 GBP1P32455 592 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 GUCY2FP51841 1108 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 SMARCB1Q12824 385 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 SYT13Q7L8C5 426 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 METTL23Q86XA0 190 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 THEM5Q8N1Q8 247 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 RPLP0P6Q8NHW5 317 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 C2orf15Q8WU43 125 aaKnown RBP15.68■□□□□ 0.1
SMC1A-204ENST00000463684 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 P2RY13Q9BPV8 354 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 ZCWPW1Q9H0M4 648 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 KIF9Q9HAQ2 790 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 EBF1Q9UH73 591 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 DSEQ9UL01 958 aa15.68■□□□□ 0.1
SMC1A-204ENST00000463684 OTOL1A6NHN0 477 aaPredicted RBP15.67■□□□□ 0.1
SMC1A-204ENST00000463684 KHNYNO15037 678 aaKnown RBP15.67■□□□□ 0.1
SMC1A-204ENST00000463684 CEACAM1P13688 526 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 ATF6P18850 670 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 TNFSF9P41273 254 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 LIG4P49917 911 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 CDR1P51861 262 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 DGKEP52429 567 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 PSMD2Q13200 908 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 PDGFRLQ15198 375 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 C11orf74Q86VG3 221 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 OR10T2Q8NGX3 314 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 SPPL2BQ8TCT7 592 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 USP13Q92995 863 aaPredicted RBP15.67■□□□□ 0.1
SMC1A-204ENST00000463684 ACDQ96AP0 544 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 ADAM33Q9BZ11 813 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 HAPLN2Q9GZV7 340 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 FBRSL1Q9HCM7 1045 aaKnown RBP15.67■□□□□ 0.1
SMC1A-204ENST00000463684 TMEM9BQ9NQ34 198 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 CCL26Q9Y258 94 aa15.67■□□□□ 0.1
SMC1A-204ENST00000463684 LNP1A1A4G5 178 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 SOBPA7XYQ1 873 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 PP2D1A8MPX8 630 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 PPEF2O14830 753 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 CYP11A1P05108 521 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 ARSAP15289 507 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 SPINK2P20155 84 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 CDC25AP30304 524 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 NEK4P51957 841 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 NLRP12P59046 1061 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 DMC1Q14565 340 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 NBR1Q14596 966 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 ZRSR1Q15695 479 aaKnown RBP15.66■□□□□ 0.1
SMC1A-204ENST00000463684 ENOX2Q16206 610 aaKnown RBP15.66■□□□□ 0.1
SMC1A-204ENST00000463684 USP39Q53GS9 565 aaKnown RBP15.66■□□□□ 0.1
SMC1A-204ENST00000463684 CD302Q8IX05 232 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 CPA6Q8N4T0 437 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 CCDC26Q8TAB7 109 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 MRPS31Q92665 395 aaKnown RBP15.66■□□□□ 0.1
SMC1A-204ENST00000463684 CHFRQ96EP1 664 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 LARSQ9P2J5 1176 aaKnown RBP15.66■□□□□ 0.1
SMC1A-204ENST00000463684 CNOT1A5YKK6 2376 aaKnown RBP15.66■□□□□ 0.1
SMC1A-204ENST00000463684 LAMA1P25391 3075 aa15.66■□□□□ 0.1
SMC1A-204ENST00000463684 LAD1O00515 517 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 OGTO15294 1046 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 F11P03951 625 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 HAPLN1P10915 354 aaPredicted RBP15.65■□□□□ 0.1
SMC1A-204ENST00000463684 CSRP1P21291 193 aaKnown RBP15.65■□□□□ 0.1
SMC1A-204ENST00000463684 U2AF2P26368 475 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMC1A-204ENST00000463684 NMT1P30419 496 aaKnown RBP15.65■□□□□ 0.1
SMC1A-204ENST00000463684 GJA4P35212 333 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 ACAP1Q15027 740 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 C9orf57Q5W0N0 161 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 TXNDC8Q6A555 127 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 JADE1Q6IE81 842 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 DTHD1Q6ZMT9 781 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 KCNK18Q7Z418 384 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 DCP1BQ8IZD4 617 aaKnown RBP15.65■□□□□ 0.1
SMC1A-204ENST00000463684 CD101Q93033 1021 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 ABI2Q9NYB9 513 aaPredicted RBP15.65■□□□□ 0.1
SMC1A-204ENST00000463684 TBX20Q9UMR3 447 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 WASF3Q9UPY6 502 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 INVSQ9Y283 1065 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 CITO14578 2027 aa15.65■□□□□ 0.1
SMC1A-204ENST00000463684 PIRO00625 290 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 CYB561D2O14569 222 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 HNRNPDLO14979 420 aaKnown RBP15.64■□□□□ 0.09
SMC1A-204ENST00000463684 ADRB2P07550 413 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 NR1H3Q13133 447 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 ZNF268Q14587 947 aaPredicted RBP15.64■□□□□ 0.09
SMC1A-204ENST00000463684 CYP2U1Q7Z449 544 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 TMEM150AQ86TG1 271 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 MON1AQ86VX9 555 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 SYT2Q8N9I0 419 aaPredicted RBP15.64■□□□□ 0.09
SMC1A-204ENST00000463684 TTC16Q8NEE8 873 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 TSTD1Q8NFU3 115 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 FBXO18Q8NFZ0 1043 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms