RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ERBB2P04626 1255 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 CHRNA3P32297 505 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 CXCL17Q6UXB2 119 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 ALKAL1Q6UXT8 129 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 C7orf31Q8N865 590 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 JOSD2Q8TAC2 188 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 UBA3Q8TBC4 463 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 WNT8BQ93098 351 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 ACSF2Q96CM8 615 aaPredicted RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 HEXIM2Q96MH2 286 aaKnown RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 FAM118BQ9BPY3 351 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 MRPL45Q9BRJ2 306 aaKnown RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 LHX5Q9H2C1 402 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 CYP3A43Q9HB55 503 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 MED4Q9NPJ6 270 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 PCYOX1Q9UHG3 505 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 R3HDM2Q9Y2K5 976 aaKnown RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 SNX24Q9Y343 169 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 CA12O43570 354 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 RALAP11233 206 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 CYBAP13498 195 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 HSPA6P17066 643 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 RFC1P35251 1148 aaPredicted RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 COILP38432 576 aaPredicted RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 TM4SF4P48230 202 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 CDC42EP1Q00587 391 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 ADCY2Q08462 1091 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 INCA1Q0VD86 236 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 SREBF2Q12772 1141 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 CLUL1Q15846 466 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 UAP1Q16222 522 aaPredicted RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 RHOT1Q8IXI2 618 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 IQCKQ8N0W5 287 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 ARRDC4Q8NCT1 418 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 C3orf20Q8ND61 904 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 LPIN3Q9BQK8 851 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 TRIM6Q9C030 488 aaPredicted RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 PLEKHA5Q9HAU0 1116 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 ADAM21Q9UKJ8 722 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 BARX2Q9UMQ3 279 aaPredicted RBP13.57□□□□□ -0.24
VAPB-203ENST00000463370 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.57□□□□□ -0.24
VAPB-203ENST00000463370 SNX9Q9Y5X1 595 aa13.57□□□□□ -0.24
VAPB-203ENST00000463370 PI4K2BG5E9Z4 385 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 M0QYV0 167 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 PIK3R2O00459 728 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 PSTPIP1O43586 416 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 FLT3LGP49771 235 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 SNX1Q13596 522 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 DHX34Q14147 1143 aaKnown RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 GNASQ5JWF2 1037 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 PPP1R2P3Q6NXS1 205 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 CCDC50Q8IVM0 306 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 CD302Q8IX05 232 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 MREGQ8N565 214 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 EMC1Q8N766 993 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 GOLGA2P5Q9HBQ8 144 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 ZDHHC18Q9NUE0 388 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.56□□□□□ -0.24
VAPB-203ENST00000463370 CNTN3Q9P232 1028 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 IP6K2Q9UHH9 426 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 CEP83Q9Y592 693 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 MED7O43513 233 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 DUSP11O75319 330 aaKnown RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 KRT14P02533 472 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 HSPA9P38646 679 aaKnown RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 GPD2P43304 727 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 RPL21P46778 160 aaKnown RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 YARSP54577 528 aaKnown RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 PRKCZQ05513 592 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 KLF1Q13351 362 aaPredicted RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 SGO2Q562F6 1265 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 ZDHHC24Q6UX98 284 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 XYLT1Q86Y38 959 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 NT5DC4Q86YG4 428 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 KATNAL2Q8IYT4 538 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 ARFGAP1Q8N6T3 406 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 EIF1ADQ8N9N8 165 aaKnown RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 RNF25Q96BH1 459 aaPredicted RBP13.56□□□□□ -0.24
VAPB-203ENST00000463370 SH3GL2Q99962 352 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 KATNAL1Q9BW62 490 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 GRHL1Q9NZI5 618 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 MTUS1Q9ULD2 1270 aa13.56□□□□□ -0.24
VAPB-203ENST00000463370 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
VAPB-203ENST00000463370 FAM187AA6NFU0 413 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 P4HA1P13674 534 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 MAN1A1P33908 653 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 PSMC1P62191 440 aaKnown RBP13.55□□□□□ -0.24
VAPB-203ENST00000463370 SOX4Q06945 474 aaPredicted RBP13.55□□□□□ -0.24
VAPB-203ENST00000463370 PDCLQ13371 301 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 PPP2R5EQ16537 467 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 FAM228AQ86W67 206 aa13.55□□□□□ -0.24
VAPB-203ENST00000463370 C12orf50Q8NA57 414 aaPredicted RBP13.55□□□□□ -0.24
VAPB-203ENST00000463370 SMG8Q8ND04 991 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms