RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CSRP2Q16527 193 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 ADALQ6DHV7 355 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.38■■□□□ 1.01
VARS-221ENST00000463184 HSCBQ8IWL3 235 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 SPPL2BQ8TCT7 592 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 LRRC15Q8TF66 581 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 STYXL1Q9Y6J8 313 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 NUP210Q8TEM1 1887 aaPredicted RBP21.37■■□□□ 1.01
VARS-221ENST00000463184 FOXD2O60548 495 aaPredicted RBP21.37■■□□□ 1.01
VARS-221ENST00000463184 PRAMEF12O95522 483 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 BMP15O95972 392 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 PLCG1P19174 1290 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 NMT1P30419 496 aaKnown RBP21.37■■□□□ 1.01
VARS-221ENST00000463184 LONP1P36776 959 aaKnown RBP21.37■■□□□ 1.01
VARS-221ENST00000463184 CYP4F8P98187 520 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 ITPRIPL2Q3MIP1 535 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 HEATR6Q6AI08 1181 aaKnown RBP21.37■■□□□ 1.01
VARS-221ENST00000463184 PRR23CQ6ZRP0 262 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 RASSF8Q8NHQ8 419 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 PYM1Q9BRP8 204 aaKnown RBP21.37■■□□□ 1.01
VARS-221ENST00000463184 SLC46A2Q9BY10 475 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 CCSER1Q9C0I3 900 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 ST6GALNAC4Q9H4F1 302 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 DPP3Q9NY33 737 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 AGO2Q9UKV8 859 aaKnown RBP21.37■■□□□ 1.01
VARS-221ENST00000463184 SMC3Q9UQE7 1217 aa21.37■■□□□ 1.01
VARS-221ENST00000463184 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.36■■□□□ 1.01
VARS-221ENST00000463184 ANKRD63C9JTQ0 380 aa21.36■■□□□ 1.01
VARS-221ENST00000463184 HAPLN1P10915 354 aaPredicted RBP21.36■■□□□ 1.01
VARS-221ENST00000463184 TNK2Q07912 1038 aa21.36■■□□□ 1.01
VARS-221ENST00000463184 SRSF5Q13243 272 aaKnown RBP21.36■■□□□ 1.01
VARS-221ENST00000463184 KARSQ15046 597 aaKnown RBP21.36■■□□□ 1.01
VARS-221ENST00000463184 LRRTM3Q86VH5 581 aa21.36■■□□□ 1.01
VARS-221ENST00000463184 WDR5BQ86VZ2 330 aa21.36■■□□□ 1.01
VARS-221ENST00000463184 DCP1BQ8IZD4 617 aaKnown RBP21.36■■□□□ 1.01
VARS-221ENST00000463184 CMTM8Q8IZV2 173 aa21.36■■□□□ 1.01
VARS-221ENST00000463184 GIPC2Q8TF65 315 aa21.36■■□□□ 1.01
VARS-221ENST00000463184 LARP4BQ92615 738 aaKnown RBP21.36■■□□□ 1.01
VARS-221ENST00000463184 C2orf42Q9NWW7 574 aa21.36■■□□□ 1.01
VARS-221ENST00000463184 DDX6P26196 483 aaKnown RBP eCLIP21.35■■□□□ 1.012e-7■□□□□ 10.3
VARS-221ENST00000463184 DDIT3P35638 169 aa21.35■■□□□ 1.01
VARS-221ENST00000463184 ZC2HC1CQ53FD0 456 aaPredicted RBP21.35■■□□□ 1.01
VARS-221ENST00000463184 WSCD1Q658N2 575 aa21.35■■□□□ 1.01
VARS-221ENST00000463184 CEP68Q76N32 757 aa21.35■■□□□ 1.01
VARS-221ENST00000463184 KRI1Q8N9T8 703 aaKnown RBP21.35■■□□□ 1.01
VARS-221ENST00000463184 INTS4Q96HW7 963 aaKnown RBP21.35■■□□□ 1.01
VARS-221ENST00000463184 GKN1Q9NS71 199 aa21.35■■□□□ 1.01
VARS-221ENST00000463184 SPTBN2O15020 2390 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 SCN1AP35498 2009 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 SOBPA7XYQ1 873 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 KPNA7A9QM74 516 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 ADRB1P08588 477 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 AVPR1AP37288 418 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 POSTNQ15063 836 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 ZNF720Q7Z2F6 126 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 NT5DC4Q86YG4 428 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 FAM160A2Q8N612 972 aaPredicted RBP21.34■■□□□ 1.01
VARS-221ENST00000463184 FAM83CQ9BQN1 747 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 ABI2Q9NYB9 513 aaPredicted RBP21.34■■□□□ 1.01
VARS-221ENST00000463184 TSC2P49815 1807 aa21.34■■□□□ 1.01
VARS-221ENST00000463184 ANK1P16157 1881 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 TISP43B9A030 160 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 IL18RAPO95256 599 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 CDR1P51861 262 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 GRIN1Q05586 938 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 RUNX3Q13761 415 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 SV2CQ496J9 727 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 LARP1BQ659C4 914 aaKnown RBP21.33■■□□□ 1.01
VARS-221ENST00000463184 MAB21L3Q8N8X9 362 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 POMGNT1Q8WZA1 660 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 HVCN1Q96D96 273 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 ZNF560Q96MR9 790 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 SMG9Q9H0W8 520 aaKnown RBP21.33■■□□□ 1.01
VARS-221ENST00000463184 PCDHB5Q9Y5E4 795 aa21.33■■□□□ 1.01
VARS-221ENST00000463184 TPRP12270 2363 aaKnown RBP21.32■■□□□ 1
VARS-221ENST00000463184 CCDC163A0A0D9SF12 145 aa21.32■■□□□ 1
VARS-221ENST00000463184 ATG13O75143 517 aa21.32■■□□□ 1
VARS-221ENST00000463184 F11P03951 625 aa21.32■■□□□ 1
VARS-221ENST00000463184 PNPLA4P41247 253 aa21.32■■□□□ 1
VARS-221ENST00000463184 NLRP12P59046 1061 aa21.32■■□□□ 1
VARS-221ENST00000463184 AMPD2Q01433 879 aa21.32■■□□□ 1
VARS-221ENST00000463184 GRSF1Q12849 480 aaKnown RBP eCLIP21.32■■□□□ 1
VARS-221ENST00000463184 TMEM196Q5HYL7 178 aa21.32■■□□□ 1
VARS-221ENST00000463184 PPM1JQ5JR12 505 aa21.32■■□□□ 1
VARS-221ENST00000463184 CRELD2Q6UXH1 353 aaPredicted RBP21.32■■□□□ 1
VARS-221ENST00000463184 BRAPQ7Z569 592 aa21.32■■□□□ 1
VARS-221ENST00000463184 TMEM150AQ86TG1 271 aa21.32■■□□□ 1
VARS-221ENST00000463184 KIF9Q9HAQ2 790 aa21.32■■□□□ 1
VARS-221ENST00000463184 RALGAPA1Q6GYQ0 2036 aa21.31■■□□□ 1
VARS-221ENST00000463184 TRDMT1O14717 391 aaKnown RBP21.31■■□□□ 1
VARS-221ENST00000463184 EXTL3O43909 919 aa21.31■■□□□ 1
VARS-221ENST00000463184 CSH1P0DML2 217 aa21.31■■□□□ 1
VARS-221ENST00000463184 CSH2P0DML3 217 aa21.31■■□□□ 1
VARS-221ENST00000463184 HMGA1P17096 107 aaKnown RBP21.31■■□□□ 1
VARS-221ENST00000463184 TSPY1Q01534 308 aa21.31■■□□□ 1
VARS-221ENST00000463184 BFSP1Q12934 665 aa21.31■■□□□ 1
VARS-221ENST00000463184 SF3A1Q15459 793 aaKnown RBP21.31■■□□□ 1
VARS-221ENST00000463184 NFE2Q16621 373 aaPredicted RBP21.31■■□□□ 1
VARS-221ENST00000463184 EFCAB13Q8IY85 973 aa21.31■■□□□ 1
VARS-221ENST00000463184 DDX1Q92499 740 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms