RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 MAGEB5Q9BZ81 275 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 SHOC2Q9UQ13 582 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 FLT1P17948 1338 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 MROH7Q68CQ1 1323 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 ALADP13716 330 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 MARK2Q7KZI7 788 aaKnown RBP16.5■□□□□ 0.23
SMC4-204ENST00000462787 PATL1Q86TB9 770 aaKnown RBP16.5■□□□□ 0.23
SMC4-204ENST00000462787 SLC26A11Q86WA9 606 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 CLEC4FQ8N1N0 589 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 DCDC2Q9UHG0 476 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 M0QZ92 97 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 H2AFYO75367 372 aaKnown RBP16.5■□□□□ 0.23
SMC4-204ENST00000462787 SGPL1O95470 568 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 ABL1P00519 1130 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 RASA1P20936 1047 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 CCDC15Q0P6D6 951 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 CNDP1Q96KN2 507 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 CCDC28BQ9BUN5 200 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 SLAIN2Q9P270 581 aa16.5■□□□□ 0.23
SMC4-204ENST00000462787 SHBGP04278 402 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 APOA4P06727 396 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 SRGAP2CP0DJJ0 459 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 GCLCP48506 637 aaPredicted RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 GSCP56915 257 aaPredicted RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 BLMHQ13867 455 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 EARS2Q5JPH6 523 aaKnown RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 PGBD4Q96DM1 585 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 INPP4AQ96PE3 977 aaPredicted RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 DCLK3Q9C098 648 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 KIAA1683Q9H0B3 1180 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 ILKAPQ9H0C8 392 aaPredicted RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 DDX18Q9NVP1 670 aaKnown RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 IVNS1ABPQ9Y6Y0 642 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 ZNF839A8K0R7 811 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 AGPSO00116 658 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 GRK2P25098 689 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 CCNHP51946 323 aaPredicted RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 TNFAIP2Q03169 654 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 ATXN7L3BQ96GX2 97 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 ASPSCR1Q9BZE9 553 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 SHCBP1LQ9BZQ2 653 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 POLR3FQ9H1D9 316 aaPredicted RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 TRPC5OSA6NMA1 111 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 MGRN1O60291 552 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 SSTR3P32745 418 aaPredicted RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 RAP1GDS1P52306 607 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 HABP4Q5JVS0 413 aaKnown RBP16.49■□□□□ 0.23
SMC4-204ENST00000462787 C16orf86Q6ZW13 317 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 PID1Q7Z2X4 250 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 FSD1LQ9BXM9 530 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 NSMCE4AQ9NXX6 385 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 KIF17Q9P2E2 1029 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 ATXN10Q9UBB4 475 aa16.49■□□□□ 0.23
SMC4-204ENST00000462787 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 DDX3XO00571 662 aaKnown RBP eCLIP16.48■□□□□ 0.234e-78■■■■■ 527.9
SMC4-204ENST00000462787 YWHABP31946 246 aaKnown RBP16.48■□□□□ 0.23
SMC4-204ENST00000462787 SFSWAPQ12872 951 aaKnown RBP16.48■□□□□ 0.23
SMC4-204ENST00000462787 FAM71DQ8N9W8 422 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 SCFD2Q8WU76 684 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 PNMA3Q9UL41 463 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 STAP1Q9ULZ2 295 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 DGKIO75912 1065 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 CDH2P19022 906 aaPredicted RBP16.48■□□□□ 0.23
SMC4-204ENST00000462787 SYCP2LQ5T4T6 812 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 DDIASQ8IXT1 998 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 OR6B3Q8NGW1 331 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 KRT35Q92764 455 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 TASP1Q9H6P5 420 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 FEM1BQ9UK73 627 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 AKT3Q9Y243 479 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 DNAJC16Q9Y2G8 782 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 FAM205AQ6ZU69 1335 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 RASSF9O75901 435 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 AKAP3O75969 853 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 ALBP02768 609 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 RARAP10276 462 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 PRKCIP41743 596 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 TBL3Q12788 808 aaKnown RBP16.48■□□□□ 0.23
SMC4-204ENST00000462787 TMTC4Q5T4D3 741 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 NET1Q7Z628 596 aaPredicted RBP16.48■□□□□ 0.23
SMC4-204ENST00000462787 TNIP2Q8NFZ5 429 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 PCDHA3Q9Y5H8 950 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 TNS3Q68CZ2 1445 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 SNX2O60749 519 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 PROSCO94903 275 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 CNTFP26441 200 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 CASP4P49662 377 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 HSPA2P54652 639 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 PTK6Q13882 451 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 ZFP1Q6P2D0 407 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 TCP10LQ8TDR4 215 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 KLHL25Q9H0H3 589 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 LRMDAQ9H2I8 198 aa16.48■□□□□ 0.23
SMC4-204ENST00000462787 MAP3K10Q02779 954 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 C16orf72Q14CZ0 275 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 MIIPQ5JXC2 388 aa16.47■□□□□ 0.23
SMC4-204ENST00000462787 PCYOX1Q9UHG3 505 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms