RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 RNF19AQ9NV58 838 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 CHMP5Q9NZZ3 219 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 ST3GAL5Q9UNP4 418 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 CYP8B1Q9UNU6 501 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 PRUNE2Q8WUY3 3088 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 PHLPP2Q6ZVD8 1323 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.32□□□□□ -1.4
VPS36-202ENST00000462289 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.32□□□□□ -1.4
VPS36-202ENST00000462289 ARHGEF35A5YM69 484 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 MYMKA6NI61 221 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 RBAK-RBAKDNI3L0D1 243 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 ACKR2O00590 384 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 FAM189A1O60320 539 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 TSPAN1O60635 241 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 USO1O60763 962 aaKnown RBP6.32□□□□□ -1.4
VPS36-202ENST00000462289 HIP1RO75146 1068 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 RPS6KA5O75582 802 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 DGKIO75912 1065 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 EOMESO95936 686 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 MYL1P05976 194 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 ADRB2P07550 413 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 PLS3P13797 630 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 AXLP30530 894 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 ANP32AP39687 249 aaKnown RBP6.32□□□□□ -1.4
VPS36-202ENST00000462289 MAPK8P45983 427 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 NPTX2P47972 431 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 EFNA5P52803 228 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 DEFB103AP81534 67 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 GTF2BQ00403 316 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 CEBPZQ03701 1054 aaKnown RBP6.32□□□□□ -1.4
VPS36-202ENST00000462289 TMEM62Q0P6H9 643 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 PPP2R5AQ15172 486 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 NKPD1Q17RQ9 610 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 SPECC1Q5M775 1068 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 ODR4Q5SWX8 454 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 SLC24A5Q71RS6 500 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 C12orf40Q86WS4 652 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 RHPN2Q8IUC4 686 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 HERC6Q8IVU3 1022 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 METTL13Q8N6R0 699 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 RNF149Q8NC42 400 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 CALML4Q96GE6 196 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 SPATA32Q96LK8 384 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 C7orf25Q9BPX7 421 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 REEP2Q9BRK0 252 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 PYM1Q9BRP8 204 aaKnown RBP6.32□□□□□ -1.4
VPS36-202ENST00000462289 GCOM2Q9BZD3 368 aaPredicted RBP6.32□□□□□ -1.4
VPS36-202ENST00000462289 INO80BQ9C086 356 aaPredicted RBP6.32□□□□□ -1.4
VPS36-202ENST00000462289 C1orf112Q9NSG2 853 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 SEL1LQ9UBV2 794 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 USP25Q9UHP3 1055 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 KCNG1Q9UIX4 513 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 MAPK8IP1Q9UQF2 711 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 AKT3Q9Y243 479 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 PCDHA11Q9Y5I1 949 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 STYXL1Q9Y6J8 313 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 VWA8A3KMH1 1905 aa6.32□□□□□ -1.4
VPS36-202ENST00000462289 M0QZ92 97 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 KLRC4O43908 158 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 FBXO24O75426 580 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 EFEMP2O95967 443 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 ACTN1P12814 892 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 PFKFB1P16118 471 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 ARF4P18085 180 aaPredicted RBP6.31□□□□□ -1.4
VPS36-202ENST00000462289 POU3F3P20264 500 aaPredicted RBP6.31□□□□□ -1.4
VPS36-202ENST00000462289 SFPQP23246 707 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS36-202ENST00000462289 SARSP49591 514 aaKnown RBP6.31□□□□□ -1.4
VPS36-202ENST00000462289 CLCN7P51798 805 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 CHMP4BP1P59074 171 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 PAK2Q13177 524 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 TFDP1Q14186 410 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 XKR4Q5GH76 650 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 NT5DC1Q5TFE4 455 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 RRAGBQ5VZM2 374 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 ZPBP2Q6X784 338 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS36-202ENST00000462289 EPM2AIP1Q7L775 607 aaPredicted RBP6.31□□□□□ -1.4
VPS36-202ENST00000462289 OTOP2Q7RTS6 562 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 DEFB128Q7Z7B8 93 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 NPAS4Q8IUM7 802 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 IQUBQ8NA54 791 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 GSTCDQ8NEC7 633 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 RNPC3Q96LT9 517 aaKnown RBP6.31□□□□□ -1.4
VPS36-202ENST00000462289 TIGD1Q96MW7 591 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 C2orf40Q9H1Z8 148 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 MTIF3Q9H2K0 278 aaKnown RBP6.31□□□□□ -1.4
VPS36-202ENST00000462289 GOLPH3LQ9H4A5 285 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 C12orf49Q9H741 205 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 TMEM161AQ9NX61 479 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 FAM8A1Q9UBU6 413 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 KCNH3Q9ULD8 1083 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 SLC4A7Q9Y6M7 1214 aa6.31□□□□□ -1.4
VPS36-202ENST00000462289 PVALEFA0A1B0GWK0 134 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 C5orf67F2Z3F1 127 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 POLR2DO15514 142 aaKnown RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 MEFVO15553 781 aaPredicted RBP6.3□□□□□ -1.4
VPS36-202ENST00000462289 LRIG2O94898 1065 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 CELA3AP09093 270 aa6.3□□□□□ -1.4
VPS36-202ENST00000462289 ATP2A2P16615 1042 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms