RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, human

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNM1-204	ENST00000461862	DLG4	P78352	724 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	POU5F1	Q01860	360 aa	Known RBP	11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	MBTD1	Q05BQ5	628 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	RAPGEF1	Q13905	1077 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	SURF1	Q15526	300 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	FSCN1	Q16658	493 aa	Known RBP	11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	KYAT1	Q16773	422 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	MPZL3	Q6UWV2	235 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	TSHZ1	Q6ZSZ6	1077 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	ZSWIM2	Q8NEG5	633 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	LMO3	Q8TAP4	145 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	PLEKHO2	Q8TD55	490 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	U2AF1L4	Q8WU68	220 aa	Known RBP	11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	PPP1R13L	Q8WUF5	828 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	LMBR1	Q8WVP7	490 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	FAM81B	Q96LP2	452 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	FNBP1	Q96RU3	617 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	STK33	Q9BYT3	514 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	TMEM117	Q9H0C3	514 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	DEF6	Q9H4E7	631 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	SPC25	Q9HBM1	224 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	LUC7L	Q9NQ29	371 aa	Known RBP	11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	RBAK	Q9NYW8	714 aa	Predicted RBP	11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	ARHGAP20	Q9P2F6	1191 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	ANKFY1	Q9P2R3	1169 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	PAXBP1	Q9Y5B6	917 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	ANK1	P16157	1881 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	RALGAPA2	Q2PPJ7	1873 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	SCN10A	Q9Y5Y9	1956 aa		11.12	□□□□□ -0.63
SCNM1-204	ENST00000461862	ATP8B3	O60423	1300 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	SMIM35	A0A1B0GVV1	85 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	INO80B-WBP1	J3KQ70	363 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	OGT	O15294	1046 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	SEPT4	O43236	478 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	GFPT2	O94808	682 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	EDN1	P05305	212 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	RPLP1	P05386	114 aa	Known RBP	11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	SMIM10L2A	P0DMW4	78 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	SMIM10L2B	P0DMW5	78 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	GNAT1	P11488	350 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	FER	P16591	822 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	STAT1	P42224	750 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	GCLM	P48507	274 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	GPC3	P51654	580 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	KIF11	P52732	1056 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	TERF1	P54274	439 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	NLRP11	P59045	1033 aa	Known RBP	11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	ETF1	P62495	437 aa	Known RBP	11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	PRPF4B	Q13523	1007 aa	Known RBP	11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	SPA17	Q15506	151 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	KIAA0753	Q2KHM9	967 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	ARHGAP29	Q52LW3	1261 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	TDRD12	Q587J7	1177 aa	Known RBP	11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	MARCH8	Q5T0T0	291 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	ATF7IP2	Q5U623	682 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	HGSNAT	Q68CP4	663 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	IQCE	Q6IPM2	695 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	NFRKB	Q6P4R8	1299 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	SRGAP1	Q7Z6B7	1085 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	BRSK2	Q8IWQ3	736 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	ACRBP	Q8NEB7	543 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	KIF18A	Q8NI77	898 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	KAT2B	Q92831	832 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	CCDC127	Q96BQ5	260 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	CGRRF1	Q99675	332 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	TSGA10	Q9BZW7	698 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	INO80B	Q9C086	356 aa	Predicted RBP	11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	HAUS4	Q9H6D7	363 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	IFT122	Q9HBG6	1241 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	MYO1A	Q9UBC5	1043 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862	TNFSF13B	Q9Y275	285 aa		11.11	□□□□□ -0.63
SCNM1-204	ENST00000461862		A0A087WZ62	844 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862		F8VZ95	297 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	ABLIM1	O14639	778 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	AKR1B10	O60218	316 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	KIF5C	O60282	957 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	FAM189A1	O60320	539 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	PGK1	P00558	417 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	GJB1	P08034	283 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	MYL3	P08590	195 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	RARB	P10826	455 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	NPR3	P17342	541 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	HOXC8	P31273	242 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	SOX5	P35711	763 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	EIF4A3	P38919	411 aa	Known RBP	11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	VAV2	P52735	878 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	ADAM17	P78536	824 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	PURA	Q00577	322 aa	Known RBP	11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	KLHL30	Q0D2K2	578 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	ASTE1	Q2TB18	679 aa	Predicted RBP	11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	ZNF568	Q3ZCX4	644 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	C15orf39	Q6ZRI6	1047 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	ENOSF1	Q7L5Y1	443 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	KIAA1328	Q86T90	577 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	VPS36	Q86VN1	386 aa		11.1	□□□□□ -0.63
SCNM1-204	ENST00000461862	FBXL13	Q8NEE6	735 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms