RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 ST13P4Q8IZP2 240 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 REXO1Q8N1G1 1221 aaKnown RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 NME8Q8N427 588 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 ANKRD42Q8N9B4 389 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 SLC35G2Q8TBE7 412 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 PIP4K2CQ8TBX8 421 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 RASGRP4Q8TDF6 673 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 GRK7Q8WTQ7 553 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 U2AF1L4Q8WU68 220 aaKnown RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 DDX17Q92841 729 aaKnown RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 GATA6Q92908 595 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 STMN2Q93045 179 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 HPS3Q969F9 1004 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 DNAJC19Q96DA6 116 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 ERP27Q96DN0 273 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 BORCS6Q96GS4 357 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 NECAB3Q96P71 396 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 HAPLN3Q96S86 360 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 IWS1Q96ST2 819 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 NDNQ99608 321 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 TBC1D10AQ9BXI6 508 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 KCTD10Q9H3F6 313 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 CDC42EP4Q9H3Q1 356 aaKnown RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 SYNCQ9H7C4 482 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 CCSER2Q9H7U1 834 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 MKNK2Q9HBH9 465 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 LRRC4CQ9HCJ2 640 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 SSU72Q9NP77 194 aaKnown RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 KCNK9Q9NPC2 374 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 LRRC4BQ9NT99 713 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 PCMTD2Q9NV79 361 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 TRMT112Q9UI30 125 aaKnown RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 SMG5Q9UPR3 1016 aaKnown RBP5.45□□□□□ -1.54
CDHR3-202ENST00000461766 TRAF3IP3Q9Y228 551 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 PCDHGB7Q9Y5F8 929 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 PCDHA3Q9Y5H8 950 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 RPS6KL1Q9Y6S9 549 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 CDK5RAP2Q96SN8 1893 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 UMODL1Q5DID0 1318 aa5.45□□□□□ -1.54
CDHR3-202ENST00000461766 ZMYM2Q9UBW7 1377 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 BTBD19C9JJ37 291 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 M0R082 166 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 PDXKO00764 312 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ADAMTS3O15072 1205 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ZSCAN9O15535 394 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 EDF1O60869 148 aaKnown RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ATP9AO75110 1047 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 TMCC1O94876 653 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 PSMG1O95456 288 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 CELA3AP09093 270 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 TROVE2P10155 538 aaKnown RBP eCLIP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 BCRP11274 1271 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 EPHA1P21709 976 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 COILP38432 576 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 IGHMBP2P38935 993 aaKnown RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 TXKP42681 527 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 SLCO1A2P46721 670 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 MTA1Q13330 715 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 LSAMPQ13449 338 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ITGA9Q13797 1035 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 PTK6Q13882 451 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 LRRC14Q15048 493 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 RASA2Q15283 850 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 NFIL3Q16649 462 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 PDK4Q16654 411 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 LONRF1Q17RB8 773 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 BMT2Q1RMZ1 405 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ACBD5Q5T8D3 534 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 RNF220Q5VTB9 566 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 SNX30Q5VWJ9 437 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 RHBDF2Q6PJF5 856 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 CHSY3Q70JA7 882 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 MIGA2Q7L4E1 593 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 PHLDB2Q86SQ0 1253 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ZC3H18Q86VM9 953 aaKnown RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 TDRPQ86YL5 185 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 PRELID2Q8N945 189 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 GALNT6Q8NCL4 622 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ZNF417Q8TAU3 575 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 GDAP1Q8TB36 358 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ZCRB1Q8TBF4 217 aaKnown RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 WDR66Q8TBY9 1149 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 MGARPQ8TDB4 240 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 TBCKQ8TEA7 893 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 C10orf82Q8WW14 230 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 IRGQQ8WZA9 623 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 GFM2Q969S9 779 aaKnown RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 SLC7A6OSQ96CW6 309 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 C18orf8Q96DM3 657 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 SNF8Q96H20 258 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 TTC25Q96NG3 672 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ZNF587Q96SQ5 575 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ZNF184Q99676 751 aaPredicted RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 ZSWIM1Q9BR11 485 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 DDX23Q9BUQ8 820 aaKnown RBP5.44□□□□□ -1.54
CDHR3-202ENST00000461766 RSRP1Q9BUV0 290 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 SPATA16Q9BXB7 569 aa5.44□□□□□ -1.54
CDHR3-202ENST00000461766 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms