RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SMARCD2Q92925 531 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 PI4K2AQ9BTU6 479 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 OXCT2Q9BYC2 517 aaPredicted RBP16.7■□□□□ 0.26
NUP50-213ENST00000461437 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 AGPAT3Q9NRZ7 376 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 DSEQ9UL01 958 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 MAFFQ9ULX9 164 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 SNX9Q9Y5X1 595 aa16.7■□□□□ 0.26
NUP50-213ENST00000461437 ZFHX2Q9C0A1 2572 aaPredicted RBP16.7■□□□□ 0.26
NUP50-213ENST00000461437 A0A1B0GVL5 298 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 KANSL1LA0AUZ9 987 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 SHISA7A6NL88 538 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 TARSP26639 723 aaKnown RBP16.69■□□□□ 0.26
NUP50-213ENST00000461437 GDI1P31150 447 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 EHHADHQ08426 723 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 STXBP4Q6ZWJ1 553 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 CACTINQ8WUQ7 758 aaKnown RBP16.69■□□□□ 0.26
NUP50-213ENST00000461437 PSMG2Q969U7 264 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 SMG9Q9H0W8 520 aaKnown RBP16.69■□□□□ 0.26
NUP50-213ENST00000461437 ATXN3LQ9H3M9 355 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 BRD9Q9H8M2 597 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 DDX43Q9NXZ2 648 aaKnown RBP16.69■□□□□ 0.26
NUP50-213ENST00000461437 ATG2BQ96BY7 2078 aa16.69■□□□□ 0.26
NUP50-213ENST00000461437 ZNF233A6NK53 670 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 HEPACAM2A8MVW5 462 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 EIF3DO15371 548 aaKnown RBP eCLIP16.68■□□□□ 0.26
NUP50-213ENST00000461437 ACTN4O43707 911 aaKnown RBP16.68■□□□□ 0.26
NUP50-213ENST00000461437 KLRC4O43908 158 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 MICAL2O94851 1124 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 HAPLN1P10915 354 aaPredicted RBP16.68■□□□□ 0.26
NUP50-213ENST00000461437 GPR158Q5T848 1215 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 CNNM4Q6P4Q7 775 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 TTC8Q8TAM2 541 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
NUP50-213ENST00000461437 ELMO3Q96BJ8 720 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 ANKRD36BP1Q96IX9 119 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 LRRC3BQ96PB8 259 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 DDX23Q9BUQ8 820 aaKnown RBP16.68■□□□□ 0.26
NUP50-213ENST00000461437 TRMT61BQ9BVS5 477 aaKnown RBP16.68■□□□□ 0.26
NUP50-213ENST00000461437 IL21Q9HBE4 155 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 LTB4R2Q9NPC1 389 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 ITGA11Q9UKX5 1188 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 CFAP45Q9UL16 551 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 R4GN57 208 aa16.68■□□□□ 0.26
NUP50-213ENST00000461437 FAM170BA6NMN3 283 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 HUS1O60921 280 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 ATP2C2O75185 946 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 PRAMEF12O95522 483 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 DLATP10515 647 aaKnown RBP16.67■□□□□ 0.26
NUP50-213ENST00000461437 PFKFB1P16118 471 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 PAX3P23760 479 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 PNPLA4P41247 253 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 NBL1P41271 181 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 RBP5P82980 135 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 PFKPQ01813 784 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 PRKCQQ04759 706 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 ADGRF2Q8IZF7 708 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 LRRC52Q8N7C0 313 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 LEMD2Q8NC56 503 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 CCDC127Q96BQ5 260 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 SHDQ96IW2 340 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 ZFYVE19Q96K21 471 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 GTF3C4Q9UKN8 822 aa16.67■□□□□ 0.26
NUP50-213ENST00000461437 NDRG2Q9UN36 371 aaKnown RBP16.67■□□□□ 0.26
NUP50-213ENST00000461437 MYH10P35580 1976 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 CST3P01034 146 aaPredicted RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 TNNC2P02585 160 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 PSMC3P17980 439 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 CYP2F1P24903 491 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 SOX9P48436 509 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 CASP4P49662 377 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 PSMC1P62191 440 aaKnown RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 TSPY1Q01534 308 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 SNRNP35Q16560 246 aaKnown RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 DDR2Q16832 855 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 SOWAHAQ2M3V2 549 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 INTS6LQ5JSJ4 861 aaKnown RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 CEP57L1Q8IYX8 460 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 DCP1BQ8IZD4 617 aaKnown RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 KIAA0895Q8NCT3 520 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 SPPL2BQ8TCT7 592 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 PLEKHO2Q8TD55 490 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 PAGE5Q96GU1 130 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 HPDLQ96IR7 371 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 SPATA32Q96LK8 384 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 PKMYT1Q99640 499 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 IRF2BPLQ9H1B7 796 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 MAGEF1Q9HAY2 307 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 MAGED2Q9UNF1 606 aaPredicted RBP16.66■□□□□ 0.26
NUP50-213ENST00000461437 NME7Q9Y5B8 376 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 PCDHB5Q9Y5E4 795 aa16.66■□□□□ 0.26
NUP50-213ENST00000461437 FAM186AA6NE01 2351 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms