RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZCWPW1Q9H0M4 648 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 KCTD10Q9H3F6 313 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 ARHGEF3Q9NR81 526 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 FRMD4BQ9Y2L6 1034 aa16.53■□□□□ 0.24
VARS-219ENST00000461328 GALR2O43603 387 aaPredicted RBP16.52■□□□□ 0.24
VARS-219ENST00000461328 AOC1P19801 751 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 CDR1P51861 262 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 EPHA5P54756 1037 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 TSPY1Q01534 308 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 TCF15Q12870 199 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 BIRC3Q13489 604 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 TRPC3Q13507 836 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 SNW1Q13573 536 aaKnown RBP16.52■□□□□ 0.24
VARS-219ENST00000461328 MGAT5BQ3V5L5 792 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 TRAPPC11Q7Z392 1133 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 SMYD4Q8IYR2 804 aaPredicted RBP16.52■□□□□ 0.24
VARS-219ENST00000461328 ADGRF2Q8IZF7 708 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 PDCL2Q8N4E4 241 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 SMARCE1Q969G3 411 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 SEPT5Q99719 369 aaPredicted RBP16.52■□□□□ 0.24
VARS-219ENST00000461328 DNAJC25Q9H1X3 360 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 TBC1D17Q9HA65 648 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 HSFX1Q9UBD0 423 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 L1RE1Q9UN81 338 aa16.52■□□□□ 0.24
VARS-219ENST00000461328 WDFY4Q6ZS81 3184 aa16.52■□□□□ 0.23
VARS-219ENST00000461328 PI15O43692 258 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 ECI2O75521 394 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 SOAT2O75908 522 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 GJA1P17302 382 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 NR2F2P24468 414 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 TUFMP49411 452 aaKnown RBP16.51■□□□□ 0.23
VARS-219ENST00000461328 CASP4P49662 377 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 MYL7Q01449 175 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 SMARCB1Q12824 385 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 VEPH1Q14D04 833 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 SCARA3Q6AZY7 606 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 DCP1BQ8IZD4 617 aaKnown RBP16.51■□□□□ 0.23
VARS-219ENST00000461328 TMEM86AQ8N2M4 240 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 GUF1Q8N442 669 aaKnown RBP16.51■□□□□ 0.23
VARS-219ENST00000461328 TOP6BLQ8N6T0 577 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 ENGASEQ8NFI3 743 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 CXorf38Q8TB03 319 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 FAM200AQ8TCP9 573 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 C2orf15Q8WU43 125 aaKnown RBP16.51■□□□□ 0.23
VARS-219ENST00000461328 MMS19Q96T76 1030 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 IRF2BPLQ9H1B7 796 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 SLITRK6Q9H5Y7 841 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 GDAP2Q9NXN4 497 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 DDX43Q9NXZ2 648 aaKnown RBP16.51■□□□□ 0.23
VARS-219ENST00000461328 ABI2Q9NYB9 513 aaPredicted RBP16.51■□□□□ 0.23
VARS-219ENST00000461328 ASB3Q9Y575 518 aa16.51■□□□□ 0.23
VARS-219ENST00000461328 H0Y858 1186 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 NRG2O14511 850 aaPredicted RBP16.5■□□□□ 0.23
VARS-219ENST00000461328 ACAT1P24752 427 aaKnown RBP16.5■□□□□ 0.23
VARS-219ENST00000461328 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
VARS-219ENST00000461328 TNNC1P63316 161 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 PFKPQ01813 784 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 TEAD2Q15562 447 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 FAM78AQ5JUQ0 283 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 TANGO2Q6ICL3 276 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 POTEHQ6S545 545 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 ITIH5Q86UX2 942 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 ERCC4Q92889 916 aaPredicted RBP16.5■□□□□ 0.23
VARS-219ENST00000461328 PSMG2Q969U7 264 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 ELSPBP1Q96BH3 223 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 SHDQ96IW2 340 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 TIGD1Q96MW7 591 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 ASB16Q96NS5 453 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 GSDMAQ96QA5 445 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 ZFP14Q9HCL3 533 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 DMAC2Q9NW81 257 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 TRAF3IP3Q9Y228 551 aa16.5■□□□□ 0.23
VARS-219ENST00000461328 A0A1W2PRU2 124 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 LRRIQ3A6PVS8 624 aaPredicted RBP16.49■□□□□ 0.23
VARS-219ENST00000461328 GADD45BO75293 160 aaPredicted RBP16.49■□□□□ 0.23
VARS-219ENST00000461328 MOSPD3O75425 235 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 KRT13P13646 458 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 FCARP24071 287 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 RPL13P26373 211 aaKnown RBP16.49■□□□□ 0.23
VARS-219ENST00000461328 PCSK1P29120 753 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 LHX1P48742 406 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 AP3M2P53677 418 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 PHLDB3Q6NSJ2 640 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 DNAJB7Q7Z6W7 309 aaPredicted RBP16.49■□□□□ 0.23
VARS-219ENST00000461328 LRRTM3Q86VH5 581 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 TMC8Q8IU68 726 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 SHKBP1Q8TBC3 707 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 SPPL2BQ8TCT7 592 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 ATOH1Q92858 354 aaPredicted RBP16.49■□□□□ 0.23
VARS-219ENST00000461328 ZSWIM3Q96MP5 696 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 LPIN3Q9BQK8 851 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 LRRC3Q9BY71 257 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 PLA2G2FQ9BZM2 168 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 PCDHA5Q9Y5H7 936 aa16.49■□□□□ 0.23
VARS-219ENST00000461328 FGF19O95750 216 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 HAPLN1P10915 354 aaPredicted RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 ATF6P18850 670 aa16.48■□□□□ 0.23
VARS-219ENST00000461328 MLF2Q15773 248 aaPredicted RBP16.48■□□□□ 0.23
VARS-219ENST00000461328 TAF12Q16514 161 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms