RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 GDAQ9Y2T3 454 aa6.45□□□□□ -1.38
NUP98-208ENST00000461047 PCDHB2Q9Y5E7 798 aa6.45□□□□□ -1.38
NUP98-208ENST00000461047 MYH9P35579 1960 aaKnown RBP6.45□□□□□ -1.38
NUP98-208ENST00000461047 UMODL1Q5DID0 1318 aa6.45□□□□□ -1.38
NUP98-208ENST00000461047 A0A0B4J269 797 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 HMX2A2RU54 273 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 MAPK13O15264 365 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 B4GALT5O43286 388 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 NR3C1P04150 777 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 ACRP10323 421 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 HARSP12081 509 aaKnown RBP6.44□□□□□ -1.38
NUP98-208ENST00000461047 IBSPP21815 317 aaPredicted RBP6.44□□□□□ -1.38
NUP98-208ENST00000461047 FGFR4P22455 802 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 NR2F2P24468 414 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 HOXA11P31270 313 aaPredicted RBP6.44□□□□□ -1.38
NUP98-208ENST00000461047 PREPP48147 710 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CYP2J2P51589 502 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CASP5P51878 434 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 AP3M2P53677 418 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 FAM189BP81408 668 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 RNASELQ05823 741 aaKnown RBP6.44□□□□□ -1.38
NUP98-208ENST00000461047 PPP2R3AQ06190 1150 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CETN1Q12798 172 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 DSC3Q14574 896 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 NFIL3Q16649 462 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CCDC40Q4G0X9 1142 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 SPATA1Q5VX52 437 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 RNF43Q68DV7 783 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CENPPQ6IPU0 288 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 OTOP2Q7RTS6 562 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 FILIP1Q7Z7B0 1213 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 MRPL10Q7Z7H8 261 aaKnown RBP6.44□□□□□ -1.38
NUP98-208ENST00000461047 ECHDC2Q86YB7 292 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 NT5DC4Q86YG4 428 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CREBRFQ8IUR6 639 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 FAM20CQ8IXL6 584 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 C12orf56Q8IXR9 622 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 THNSL1Q8IYQ7 743 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CSGALNACT2Q8N6G5 542 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CCDC150Q8NCX0 1101 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 GIMAP7Q8NHV1 300 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 TMEM174Q8WUU8 243 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 HERVK_113Q902F9 699 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 RNPC3Q96LT9 517 aaKnown RBP6.44□□□□□ -1.38
NUP98-208ENST00000461047 FAM193BQ96PV7 902 aaPredicted RBP6.44□□□□□ -1.38
NUP98-208ENST00000461047 FNBP1Q96RU3 617 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 FIZ1Q96SL8 496 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 SLC9A7Q96T83 725 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 MRPL9Q9BYD2 267 aaKnown RBP6.44□□□□□ -1.38
NUP98-208ENST00000461047 TSPY26PQ9H489 355 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 PDZD7Q9H5P4 517 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 ASB7Q9H672 318 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 LIN7BQ9HAP6 207 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 AGPAT3Q9NRZ7 376 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 SLC38A7Q9NVC3 462 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 HSPBP1Q9NZL4 362 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 CTNND2Q9UQB3 1225 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 GIT1Q9Y2X7 761 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 STYXL1Q9Y6J8 313 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 DOCK5Q9H7D0 1870 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 LOXHD1Q8IVV2 1947 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 ADGRA3Q8IWK6 1321 aa6.44□□□□□ -1.38
NUP98-208ENST00000461047 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 MEGF11A6BM72 1044 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 C9IYK1 514 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 ANKRD63C9JTQ0 380 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 H0YGN5 161 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 CLIC2O15247 247 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 SLC16A3O15427 465 aaKnown RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 ESRRAP11474 423 aaPredicted RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 ATP2A2P16615 1042 aaKnown RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 PROZP22891 400 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 PAX3P23760 479 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 ITGB8P26012 769 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 BMP8BP34820 402 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 MAGEA10P43363 369 aaPredicted RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 ZNF165P49910 485 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 OSTNP61366 133 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 ENPEPQ07075 957 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 SPAG1Q07617 926 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 BMS1Q14692 1282 aaKnown RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 SNRNP35Q16560 246 aaKnown RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 ANO6Q4KMQ2 910 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 HP1BP3Q5SSJ5 553 aaPredicted RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 TMEM240Q5SV17 173 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 PEAR1Q5VY43 1037 aaPredicted RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 HGSNATQ68CP4 663 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 ANKRD40Q6AI12 368 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 INTS8Q75QN2 995 aaKnown RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 SMYD4Q8IYR2 804 aaPredicted RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 ENOX1Q8TC92 643 aaKnown RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 YME1L1Q96TA2 773 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 FAM83CQ9BQN1 747 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 BPIFA3Q9BQP9 254 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 FAM213AQ9BRX8 229 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 APOL6Q9BWW8 343 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 SRRTQ9BXP5 876 aaKnown RBP6.43□□□□□ -1.38
NUP98-208ENST00000461047 DNAI2Q9GZS0 605 aa6.43□□□□□ -1.38
NUP98-208ENST00000461047 TMEM117Q9H0C3 514 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms