RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 LINC00271P0C7V0 271 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 KRT5P13647 590 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 CPB1P15086 417 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 TKTP29401 623 aaKnown RBP11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 ASPAP45381 313 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 SNX16P57768 344 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 POLR2FP61218 127 aaKnown RBP11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 INCA1Q0VD86 236 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 KIAA0319Q5VV43 1072 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 WSCD1Q658N2 575 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 SLC8B1Q6J4K2 584 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 LIMS2Q7Z4I7 341 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 CNGA4Q8IV77 575 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 RNF168Q8IYW5 571 aaPredicted RBP11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 NAP1L5Q96NT1 182 aaPredicted RBP11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 RXFP1Q9HBX9 757 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 EHD2Q9NZN4 543 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 HSFX1Q9UBD0 423 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 HCSTQ9UBK5 93 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 MTRRQ9UBK8 725 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 L1RE1Q9UN81 338 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 LUC7L2Q9Y383 392 aaKnown RBP11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 CEP83Q9Y592 693 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 PCDHB4Q9Y5E5 795 aa11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 BZW2Q9Y6E2 419 aaKnown RBP11.75□□□□□ -0.53
SMNDC1-203ENST00000460483 TET1Q8NFU7 2136 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 I3L4J1 428 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 C2CD2LO14523 706 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 PPEF2O14830 753 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 EFEMP2O95967 443 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 CD58P19256 250 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 KLRC2P26717 231 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 USP8P40818 1118 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 KCNMA1Q12791 1236 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 PLD1Q13393 1074 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 MRPL58Q14197 206 aaKnown RBP11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 ARHGAP44Q17R89 818 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 HABP4Q5JVS0 413 aaKnown RBP11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 SPOPLQ6IQ16 392 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 PHLDB3Q6NSJ2 640 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 PPP1R2P3Q6NXS1 205 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 TMEM270Q6UE05 265 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 SCARA5Q6ZMJ2 495 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 CCDC149Q6ZUS6 474 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 VPS36Q86VN1 386 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 TMEM173Q86WV6 379 aaPredicted RBP11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 CRYBG2Q8N1P7 616 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 LNX1Q8TBB1 728 aaPredicted RBP11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 SPPL2BQ8TCT7 592 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 HDAC7Q8WUI4 952 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 TATDN2Q93075 761 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 TMEM176AQ96HP8 235 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 CEP295NLQ96MC4 621 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 PDCL3Q9H2J4 239 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 CERS4Q9HA82 394 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 APOBEC3GQ9HC16 384 aaKnown RBP11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 ABCB6Q9NP58 842 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 IMPACTQ9P2X3 320 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 CACNG4Q9UBN1 327 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 HESX1Q9UBX0 185 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 SIK3Q9Y2K2 1263 aa11.74□□□□□ -0.53
SMNDC1-203ENST00000460483 GRM6O15303 877 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 TEX33O43247 280 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 CILPO75339 1184 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 VDRP11473 427 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 FERP16591 822 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 CDC25BP30305 580 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 PDE6CP51160 858 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 ZNF75DP51815 510 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 NDST1P52848 882 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 ZBED6P86452 979 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 GPR17Q13304 367 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 RAB33AQ14088 237 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 PTPN14Q15678 1187 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 SGO2Q562F6 1265 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 INTS6LQ5JSJ4 861 aaKnown RBP11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 RTP2Q5QGT7 225 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 LIN9Q5TKA1 542 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 CD300LGQ6UXG3 332 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 ZNF677Q86XU0 584 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 SPATA2LQ8IUW3 424 aaPredicted RBP11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 VSTM4Q8IW00 320 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 B3GALNT2Q8NCR0 500 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 ZNF461Q8TAF7 563 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 MYCBPAPQ8TBZ2 947 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 SYN2Q92777 582 aaPredicted RBP11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 HEXIM2Q96MH2 286 aaKnown RBP11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 NOX5Q96PH1 765 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 SYT15Q9BQS2 421 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 ELOVL4Q9GZR5 314 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 PLEKHA4Q9H4M7 779 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 NSUN3Q9H649 340 aaKnown RBP11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 SMYD3Q9H7B4 428 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 TLE6Q9H808 572 aa11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMNDC1-203ENST00000460483 POLIQ9UNA4 740 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms