RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 KRTAP10-11P60412 298 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 HTRA4P83105 476 aaPredicted RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 BIRC2Q13490 618 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 MORC3Q14149 939 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 HABP2Q14520 560 aaPredicted RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 XRRA1Q6P2D8 792 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 ZNF783Q6ZMS7 281 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 LRRC55Q6ZSA7 311 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 SRLQ86TD4 932 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 MORC1Q86VD1 984 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 SPICE1Q8N0Z3 855 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 ZNF276Q8N554 614 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 OR2C3Q8N628 320 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 AOPEPQ8N6M6 819 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 OR6B3Q8NGW1 331 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 DDX17Q92841 729 aaKnown RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 TRIM43Q96BQ3 446 aaPredicted RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 SGCZQ96LD1 299 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 BBC3Q96PG8 261 aaPredicted RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 MLST8Q9BVC4 326 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 UNKQ9C0B0 810 aaKnown RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 ZNF287Q9HBT7 754 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 ETAA1Q9NY74 926 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 HSFX1Q9UBD0 423 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 RGS17Q9UGC6 210 aaPredicted RBP4.2□□□□□ -1.74
RFC4-211ENST00000460408 ZNHIT2Q9UHR6 403 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 OGDHLQ9ULD0 1010 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 FZD1Q9UP38 647 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 HS3ST4Q9Y661 456 aa4.2□□□□□ -1.74
RFC4-211ENST00000460408 MARCH11A6NNE9 402 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 ZAR1LA6NP61 321 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 AHRRA9YTQ3 701 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 DIRC3C9JPN6 131 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 MASP2O00187 686 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 TRIM24O15164 1050 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 GNAI2P04899 355 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 THP07101 528 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 ELANEP08246 267 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 ZKSCAN1P17029 563 aaPredicted RBP4.19□□□□□ -1.74
RFC4-211ENST00000460408 NR4A1P22736 598 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 KCNJ5P48544 419 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 SLC11A2P49281 568 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 POU6F2P78424 691 aaPredicted RBP4.19□□□□□ -1.74
RFC4-211ENST00000460408 OCA2Q04671 838 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 SLC13A2Q13183 592 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 CTBP1Q13363 440 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 DAG1Q14118 895 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 C3orf38Q5JPI3 329 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 COLEC12Q5KU26 742 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 LY6G5CQ5SRR4 150 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 SYCE2Q6PIF2 218 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 USP37Q86T82 979 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 DPP9Q86TI2 863 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 FAM186BQ8IYM0 893 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 CFAP52Q8N1V2 620 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 SYNE4Q8N205 404 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 Q8NA96 180 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 SLC17A8Q8NDX2 589 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 OR56A1Q8NGH5 318 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 MARS2Q96GW9 593 aaKnown RBP4.19□□□□□ -1.74
RFC4-211ENST00000460408 LRIG1Q96JA1 1093 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 PHACTR3Q96KR7 559 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 CCDC138Q96M89 665 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 DCLRE1CQ96SD1 692 aaKnown RBP4.19□□□□□ -1.74
RFC4-211ENST00000460408 MYD88Q99836 296 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 TEX101Q9BY14 249 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 IMPG2Q9BZV3 1241 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 NLRC4Q9NPP4 1024 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 TAGLN3Q9UI15 199 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 USP15Q9Y4E8 981 aaPredicted RBP4.19□□□□□ -1.74
RFC4-211ENST00000460408 PLEKHM1Q9Y4G2 1056 aa4.19□□□□□ -1.74
RFC4-211ENST00000460408 A0A1B0GTW7 788 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 PPFIA4O75335 1185 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 KIF20AO95235 890 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 IL18RAPO95256 599 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 GRPP07492 148 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 TNFSF4P23510 183 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 UCP3P55916 312 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 RNASE9P60153 205 aaKnown RBP4.18□□□□□ -1.74
RFC4-211ENST00000460408 RPS16P62249 146 aaKnown RBP4.18□□□□□ -1.74
RFC4-211ENST00000460408 BOP1Q14137 746 aaKnown RBP4.18□□□□□ -1.74
RFC4-211ENST00000460408 PTPAQ15257 358 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 PDCD4Q53EL6 469 aaKnown RBP4.18□□□□□ -1.74
RFC4-211ENST00000460408 ZKSCAN2Q63HK3 967 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 TSHZ3Q63HK5 1081 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 TMPRSS9Q7Z410 1059 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 GDF7Q7Z4P5 450 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 PCSK9Q8NBP7 692 aaKnown RBP4.18□□□□□ -1.74
RFC4-211ENST00000460408 PROKR1Q8TCW9 393 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 TNIP3Q96KP6 325 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 RIPOR3Q96MK2 946 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 PNKPQ96T60 521 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 CNPPD1Q9BV87 410 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 SPATA5L1Q9BVQ7 753 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 COLEC11Q9BWP8 271 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 ZNF518BQ9C0D4 1074 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 TOR3AQ9H497 397 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 RNPEPQ9H4A4 650 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 PNPLA8Q9NP80 782 aa4.18□□□□□ -1.74
RFC4-211ENST00000460408 ADARB2Q9NS39 739 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms