RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GRK7Q8WTQ7 553 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 MAIP1Q8WWC4 291 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 CPB2Q96IY4 423 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 FAM81BQ96LP2 452 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 SOWAHBA6NEL2 793 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 FARP2O94887 1054 aaPredicted RBP16.25■□□□□ 0.19
LMNB1-203ENST00000460265 ATP2A2P16615 1042 aaKnown RBP16.25■□□□□ 0.19
LMNB1-203ENST00000460265 PSMC1P62191 440 aaKnown RBP16.25■□□□□ 0.19
LMNB1-203ENST00000460265 KCNJ2P63252 427 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 TMEM63BQ5T3F8 832 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 METTL7BQ6UX53 244 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 ABRAQ8N0Z2 381 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 GPC2Q8N158 579 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 TMEM130Q8N3G9 435 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 CCDC89Q8N998 374 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 PARVAQ9NVD7 372 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 SAE1Q9UBE0 346 aaPredicted RBP16.25■□□□□ 0.19
LMNB1-203ENST00000460265 POLIQ9UNA4 740 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 COL4A5P29400 1685 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 DPPA5A6NC42 116 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 F8VP50 259 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 MAP3K6O95382 1288 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 YARSP54577 528 aaKnown RBP16.25■□□□□ 0.19
LMNB1-203ENST00000460265 EIF3BP55884 814 aaKnown RBP16.25■□□□□ 0.19
LMNB1-203ENST00000460265 DUPD1Q68J44 220 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 SCARA3Q6AZY7 606 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 LBX2Q6XYB7 198 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 KIF2BQ8N4N8 673 aa16.25■□□□□ 0.19
LMNB1-203ENST00000460265 NAF1Q96HR8 494 aaKnown RBP16.25■□□□□ 0.19
LMNB1-203ENST00000460265 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
LMNB1-203ENST00000460265 CHN1P15882 459 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 DRD4P21917 467 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 EFNA5P52803 228 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 GPS1Q13098 491 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 SRRM1Q8IYB3 904 aaKnown RBP16.24■□□□□ 0.19
LMNB1-203ENST00000460265 UBA3Q8TBC4 463 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 EPAS1Q99814 870 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 SAYSD1Q9NPB0 183 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 R3HDM2Q9Y2K5 976 aaKnown RBP16.24■□□□□ 0.19
LMNB1-203ENST00000460265 SCINQ9Y6U3 715 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 TAS2R40P59535 323 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 TTLL4Q14679 1199 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 IER5Q5VY09 327 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 IZUMO3Q5VZ72 239 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 MREGQ8N565 214 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 ATL2Q8NHH9 583 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 FEZF2Q8TBJ5 459 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 FAM167AQ96KS9 214 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 STMN4Q9H169 189 aaPredicted RBP16.24■□□□□ 0.19
LMNB1-203ENST00000460265 SNCAIPQ9Y6H5 919 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 CYP1A2P05177 515 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 ZSCAN5DPP0CG00 497 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 NQO1P15559 274 aaKnown RBP16.24■□□□□ 0.19
LMNB1-203ENST00000460265 HHATQ5VTY9 493 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 EEF1DP3Q658K8 133 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 OR6B2Q6IFH4 312 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 TAOK1Q7L7X3 1001 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 TRPM8Q7Z2W7 1104 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 ANKRD13AQ8IZ07 590 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.24■□□□□ 0.193e-13■■■■■ 28.7
LMNB1-203ENST00000460265 MORC4Q8TE76 937 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 RSAD2Q8WXG1 361 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.24■□□□□ 0.19
LMNB1-203ENST00000460265 ARHGEF2Q92974 986 aaKnown RBP16.24■□□□□ 0.19
LMNB1-203ENST00000460265 OPTNQ96CV9 577 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 CGRRF1Q99675 332 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 SENP7Q9BQF6 1050 aa16.24■□□□□ 0.19
LMNB1-203ENST00000460265 LRRC37AA6NMS7 1700 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 SYNJ2BP-COX16A0A087WUM0 186 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 A0A087WZ62 844 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 C5orf60A6NFR6 353 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 OGTO15294 1046 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 RNF8O76064 485 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 ARIH2O95376 493 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 C4BPAP04003 597 aaKnown RBP16.23■□□□□ 0.19
LMNB1-203ENST00000460265 ITGB3P05106 788 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 POLR2BP30876 1174 aaKnown RBP16.23■□□□□ 0.19
LMNB1-203ENST00000460265 RFC5P40937 340 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 RGS7P49802 495 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 TMED2Q15363 201 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 P3H1Q32P28 736 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 C6orf118Q5T5N4 469 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 LRIG3Q6UXM1 1119 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 ARHGAP22Q7Z5H3 698 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 RUNDC3BQ96NL0 473 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 XPO6Q96QU8 1125 aaKnown RBP16.23■□□□□ 0.19
LMNB1-203ENST00000460265 FDXACB1Q9BRP7 624 aaPredicted RBP16.23■□□□□ 0.19
LMNB1-203ENST00000460265 DHX33Q9H6R0 707 aaKnown RBP16.23■□□□□ 0.19
LMNB1-203ENST00000460265 COX16Q9P0S2 106 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 ATP2A1O14983 1001 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 PIAS1O75925 651 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 ZNF286BP0CG31 522 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 PEX5P50542 639 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 MXD4Q14582 209 aaPredicted RBP16.23■□□□□ 0.19
LMNB1-203ENST00000460265 SGSM1Q2NKQ1 1148 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 AGAP1Q9UPQ3 857 aa16.23■□□□□ 0.19
LMNB1-203ENST00000460265 A0A0B4J269 797 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 IGF2BP3O00425 579 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMNB1-203ENST00000460265 MAPK13O15264 365 aa16.22■□□□□ 0.19
LMNB1-203ENST00000460265 KRT3P12035 628 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms