RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TCF25Q9BQ70 676 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 NAA15Q9BXJ9 866 aaKnown RBP13.15□□□□□ -0.3
HDAC4-206ENST00000460235 ZBP1Q9H171 429 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 PDCL3Q9H2J4 239 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 SMYD3Q9H7B4 428 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 HCSTQ9UBK5 93 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 MTRRQ9UBK8 725 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 HESX1Q9UBX0 185 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 CNTN6Q9UQ52 1028 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 FHOD1Q9Y613 1164 aa13.15□□□□□ -0.3
HDAC4-206ENST00000460235 F8VZ95 297 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 NOL4O94818 638 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 EFEMP2O95967 443 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 LINC00271P0C7V0 271 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 SRGAP2BP0DMP2 458 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 CPB1P15086 417 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 PTPN1P18031 435 aaKnown RBP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 ANXA13P27216 316 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 ELF1P32519 619 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 CDH8P55286 799 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 ASIC2Q16515 512 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 MEA1Q16626 185 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 KIAA0319Q5VV43 1072 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 TMEM173Q86WV6 379 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 RBBP8NLQ8NC74 664 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 B3GALNT2Q8NCR0 500 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 CPLX3Q8WVH0 158 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 FUBP3Q96I24 572 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 KREMEN1Q96MU8 473 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 CDCA3Q99618 268 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 SYT15Q9BQS2 421 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 MRPL45Q9BRJ2 306 aaKnown RBP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 RXFP1Q9HBX9 757 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 ALG13Q9NP73 1137 aaKnown RBP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 AIPL1Q9NZN9 384 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 HSFX1Q9UBD0 423 aa13.14□□□□□ -0.31
HDAC4-206ENST00000460235 TIMM13Q9Y5L4 95 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-206ENST00000460235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-206ENST00000460235 FOXN3O00409 490 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-206ENST00000460235 NCK2O43639 380 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 LRRN2O75325 713 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 PDGFRBP09619 1106 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 CD19P15391 556 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 GNA15P30679 374 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 CASP14P31944 242 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 TUFMP49411 452 aaKnown RBP13.13□□□□□ -0.31
HDAC4-206ENST00000460235 KLK7P49862 253 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 JAM2P57087 298 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 GPR17Q13304 367 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 INTS6LQ5JSJ4 861 aaKnown RBP13.13□□□□□ -0.31
HDAC4-206ENST00000460235 RTP2Q5QGT7 225 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 SLC8B1Q6J4K2 584 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 TRIM72Q6ZMU5 477 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 SPATA2LQ8IUW3 424 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-206ENST00000460235 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 LNX1Q8TBB1 728 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-206ENST00000460235 MYCBPAPQ8TBZ2 947 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 SPPL2BQ8TCT7 592 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 KBTBD7Q8WVZ9 684 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 MRPL38Q96DV4 380 aaKnown RBP13.13□□□□□ -0.31
HDAC4-206ENST00000460235 CEP295NLQ96MC4 621 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 NOX5Q96PH1 765 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 TTYH3Q9C0H2 523 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 MIS12Q9H081 205 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 ZCWPW1Q9H0M4 648 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 ABCB6Q9NP58 842 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 PCDHB5Q9Y5E4 795 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 PTPRSQ13332 1948 aa13.13□□□□□ -0.31
HDAC4-206ENST00000460235 SCN1AP35498 2009 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 F8W810 466 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 C2CD2LO14523 706 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 GFPT2O94808 682 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 GYPCP04921 128 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 SERPING1P05155 500 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 PTMAP06454 111 aaKnown RBP13.12□□□□□ -0.31
HDAC4-206ENST00000460235 ACO1P21399 889 aaKnown RBP13.12□□□□□ -0.31
HDAC4-206ENST00000460235 KLRC2P26717 231 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 RAP1GAPP47736 663 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 RAD23BP54727 409 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 KLHL30Q0D2K2 578 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 PLD1Q13393 1074 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 RAB33AQ14088 237 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 CNGA2Q16280 664 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 GJB7Q6PEY0 223 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 VSTM1Q6UX27 236 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 CCDC149Q6ZUS6 474 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 ACOT1Q86TX2 421 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 ZNF461Q8TAF7 563 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 HDAC7Q8WUI4 952 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 BCL7CQ8WUZ0 217 aaPredicted RBP13.12□□□□□ -0.31
HDAC4-206ENST00000460235 CYFIP2Q96F07 1278 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 PANX2Q96RD6 677 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 GAS2L1Q99501 681 aaPredicted RBP13.12□□□□□ -0.31
HDAC4-206ENST00000460235 ARID3AQ99856 593 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 MED10Q9BTT4 135 aa13.12□□□□□ -0.31
HDAC4-206ENST00000460235 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms