RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 ICE2Q659A1 982 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 SYDE1Q6ZW31 735 aaPredicted RBP19.16■□□□□ 0.66
HPS3-202ENST00000460120 ZBTB8OSQ8IWT0 167 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 C3orf20Q8ND61 904 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 SPATA33Q96N06 139 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 TMEM134Q9H6X4 195 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 MINDY3Q9H8M7 445 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 KCNG1Q9UIX4 513 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 OGTO15294 1046 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 ITGBL1O95965 494 aaPredicted RBP19.16■□□□□ 0.66
HPS3-202ENST00000460120 PSMA2P25787 234 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 KLRC2P26717 231 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 NRLP54845 237 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 FAM47EQ6ZV65 393 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 ARMC9Q7Z3E5 817 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 HMGXB4Q9UGU5 601 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 CYTH4Q9UIA0 394 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 GGA2Q9UJY4 613 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 STX2P32856 288 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 ABCD1P33897 745 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 ZNF132P52740 706 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 TNFAIP8L3Q5GJ75 292 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 CROCCP2Q86T23 111 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 ZBED8Q8IZ13 594 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 TXNRD2Q9NNW7 524 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 KLC4Q9NSK0 619 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 EXOC1LA0A1B0GW35 172 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 RASA4BC9J798 803 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 RASA4O43374 803 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 ECM2O94769 699 aaPredicted RBP19.15■□□□□ 0.66
HPS3-202ENST00000460120 TJP3O95049 919 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 CALB1P05937 261 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 R3HDM1Q15032 1099 aaKnown RBP19.15■□□□□ 0.66
HPS3-202ENST00000460120 METTL7BQ6UX53 244 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 RCOR2Q8IZ40 523 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 RBM41Q96IZ5 413 aaKnown RBP19.15■□□□□ 0.66
HPS3-202ENST00000460120 VCPIP1Q96JH7 1222 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 PDGFCQ9NRA1 345 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 CSADQ9Y600 493 aa19.15■□□□□ 0.66
HPS3-202ENST00000460120 CD48P09326 243 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 GTF2A1P52655 376 aaPredicted RBP19.14■□□□□ 0.65
HPS3-202ENST00000460120 TTLL12Q14166 644 aaPredicted RBP19.14■□□□□ 0.65
HPS3-202ENST00000460120 TAF5Q15542 800 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 SGSM1Q2NKQ1 1148 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 PTPN20Q4JDL3 420 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 HIBCHQ6NVY1 386 aaPredicted RBP19.14■□□□□ 0.65
HPS3-202ENST00000460120 EFCC1Q9HA90 598 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 RGPD3A6NKT7 1758 aaPredicted RBP19.14■□□□□ 0.65
HPS3-202ENST00000460120 RGPD4Q7Z3J3 1758 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 DDNO94850 711 aaPredicted RBP19.14■□□□□ 0.65
HPS3-202ENST00000460120 HOXC6P09630 235 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 ASPAP45381 313 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 Q3C1V9 767 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 ATF7IP2Q5U623 682 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 ZPBP2Q6X784 338 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.14■□□□□ 0.65
HPS3-202ENST00000460120 PIGWQ7Z7B1 504 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 RIOX2Q8IUF8 465 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 C4orf33Q8N1A6 199 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 TGS1Q96RS0 853 aaKnown RBP19.14■□□□□ 0.65
HPS3-202ENST00000460120 GPR20Q99678 358 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 CPSF3Q9UKF6 684 aaKnown RBP19.14■□□□□ 0.65
HPS3-202ENST00000460120 CNTN6Q9UQ52 1028 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 CEP83Q9Y592 693 aa19.14■□□□□ 0.65
HPS3-202ENST00000460120 ZBTB42B2RXF5 422 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 TNNC2P02585 160 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 NFICP08651 508 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 PSMC1P62191 440 aaKnown RBP19.13■□□□□ 0.65
HPS3-202ENST00000460120 CAV1Q03135 178 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 HSPH1Q92598 858 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 NSRP1Q9H0G5 558 aaKnown RBP19.13■□□□□ 0.65
HPS3-202ENST00000460120 SMYD3Q9H7B4 428 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 ACTR5Q9H9F9 607 aaPredicted RBP19.13■□□□□ 0.65
HPS3-202ENST00000460120 METTL5Q9NRN9 209 aaKnown RBP19.13■□□□□ 0.65
HPS3-202ENST00000460120 LCTP09848 1927 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 ASAP2O43150 1006 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 IQCF3P0C7M6 154 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 IL1R2P27930 398 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 GDF10P55107 478 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 IER5Q5VY09 327 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 EFCAB12Q6NXP0 572 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 UBR7Q8N806 425 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 CPB2Q96IY4 423 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 TWNKQ96RR1 684 aa19.13■□□□□ 0.65
HPS3-202ENST00000460120 hCG_1818297A0A087WSY0 165 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 KRT3P12035 628 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 EFNA5P52803 228 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 ENPEPQ07075 957 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 PLCB4Q15147 1175 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 EAPPQ56P03 285 aaPredicted RBP19.12■□□□□ 0.65
HPS3-202ENST00000460120 TBC1D1Q86TI0 1168 aaPredicted RBP19.12■□□□□ 0.65
HPS3-202ENST00000460120 SPOCK2Q92563 424 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 ASCC2Q9H1I8 757 aaPredicted RBP19.12■□□□□ 0.65
HPS3-202ENST00000460120 NKIRAS1Q9NYS0 192 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 DNALI1O14645 258 aaPredicted RBP19.12■□□□□ 0.65
HPS3-202ENST00000460120 KRT15P19012 456 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 ATP5DP30049 168 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 PDIA2Q13087 525 aaKnown RBP19.12■□□□□ 0.65
HPS3-202ENST00000460120 EFTUD2Q15029 972 aaKnown RBP eCLIP19.12■□□□□ 0.65
HPS3-202ENST00000460120 TFDP3Q5H9I0 405 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms