RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 CATSPERGQ6ZRH7 1159 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 YAF2Q8IY57 180 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 ANKRD42Q8N9B4 389 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 ZNF527Q8NB42 609 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 CCDC150Q8NCX0 1101 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 OR56A1Q8NGH5 318 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 TEPSINQ96N21 525 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 DCLRE1CQ96SD1 692 aaKnown RBP6.57□□□□□ -1.36
CCDC50-203ENST00000460064 NEU1Q99519 415 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 RNPEPQ9H4A4 650 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 ETAA1Q9NY74 926 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 HESX1Q9UBX0 185 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 MID2Q9UJV3 735 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 TBC1D30Q9Y2I9 924 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 RAD54BQ9Y620 910 aa6.57□□□□□ -1.36
CCDC50-203ENST00000460064 A0A1B0GTW7 788 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 DIRC3C9JPN6 131 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 FFAR2O15552 330 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 ERN1O75460 977 aaKnown RBP6.56□□□□□ -1.36
CCDC50-203ENST00000460064 GPANK1O95872 356 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 MYL4P12829 197 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 IL1R1P14778 569 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 BTF3P20290 206 aaKnown RBP6.56□□□□□ -1.36
CCDC50-203ENST00000460064 CHRM3P20309 590 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 IL1R2P27930 398 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 VIPR2P41587 438 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 WNT3P56703 355 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 PUM3Q15397 648 aaKnown RBP6.56□□□□□ -1.36
CCDC50-203ENST00000460064 TAPT1Q6NXT6 567 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 LAYNQ6UX15 382 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 HTR3DQ70Z44 454 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 LRIG1Q96JA1 1093 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 RBM15Q96T37 977 aaKnown RBP eCLIP6.56□□□□□ -1.36
CCDC50-203ENST00000460064 ZSWIM1Q9BR11 485 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 TTLL2Q9BWV7 592 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 TRPM5Q9NZQ8 1165 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 VSX1Q9NZR4 365 aaPredicted RBP6.56□□□□□ -1.36
CCDC50-203ENST00000460064 HSFX1Q9UBD0 423 aa6.56□□□□□ -1.36
CCDC50-203ENST00000460064 MTO1Q9Y2Z2 717 aaKnown RBP6.56□□□□□ -1.36
CCDC50-203ENST00000460064 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 CCDC195A0A1B0GUA6 201 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 hCG_1642624A0A1W2PR95 340 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 RAB27BO00194 218 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 HNRNPDLO14979 420 aaKnown RBP6.55□□□□□ -1.36
CCDC50-203ENST00000460064 RECQL4O94761 1208 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 SPATA31D3P0C874 917 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 FGFR4P22455 802 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 CHKAP35790 457 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 HSD11B2P80365 405 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 SATB1Q01826 763 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 ICA1Q05084 483 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 ICAM4Q14773 271 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 CCDC38Q502W7 563 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 PLA1AQ53H76 456 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 TAF2Q6P1X5 1199 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 SPATA31D4Q6ZUB0 917 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 VGLL2Q8N8G2 317 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 PSD4Q8NDX1 1056 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 POC1BQ8TC44 478 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 MUL1Q969V5 352 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 MED15Q96RN5 788 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 PPP1R9BQ96SB3 815 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 ADOQ96SZ5 270 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 HEPHQ9BQS7 1158 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 MESP1Q9BRJ9 268 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 EIF2AQ9BY44 585 aaKnown RBP6.55□□□□□ -1.36
CCDC50-203ENST00000460064 DEF6Q9H4E7 631 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 SORCS3Q9UPU3 1222 aa6.55□□□□□ -1.36
CCDC50-203ENST00000460064 MORC2Q9Y6X9 1032 aaPredicted RBP6.55□□□□□ -1.36
CCDC50-203ENST00000460064 LOC102723971A0A1B0GUV8 181 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 CCDC78A2IDD5 438 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 CLCA1A8K7I4 914 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 DCLK1O15075 740 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 RPS6KA4O75676 772 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 SCAF4O95104 1147 aaKnown RBP6.54□□□□□ -1.36
CCDC50-203ENST00000460064 ITGB3P05106 788 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 ATXN1LP0C7T5 689 aaKnown RBP6.54□□□□□ -1.36
CCDC50-203ENST00000460064 ALDH9A1P49189 494 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 PPM1FP49593 454 aaPredicted RBP6.54□□□□□ -1.36
CCDC50-203ENST00000460064 TOB1P50616 345 aaPredicted RBP6.54□□□□□ -1.36
CCDC50-203ENST00000460064 KRT17Q04695 432 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 ARHGEF7Q14155 803 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 RRP1BQ14684 758 aaKnown RBP6.54□□□□□ -1.36
CCDC50-203ENST00000460064 MGAT5BQ3V5L5 792 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 TUBB8Q3ZCM7 444 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 PDCD4Q53EL6 469 aaKnown RBP6.54□□□□□ -1.36
CCDC50-203ENST00000460064 FBXO38Q6PIJ6 1188 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 ZNF280BQ86YH2 543 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 MAPKAPK5Q8IW41 473 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 FANCBQ8NB91 859 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 ZNF483Q8TF39 744 aaPredicted RBP6.54□□□□□ -1.36
CCDC50-203ENST00000460064 CCT6BQ92526 530 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 MAGEB5Q9BZ81 275 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 XPNPEP3Q9NQH7 507 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 RNF181Q9P0P0 153 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 CTTNBP2NLQ9P2B4 639 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 SHOC2Q9UQ13 582 aa6.54□□□□□ -1.36
CCDC50-203ENST00000460064 H7C4K7 107 aa6.53□□□□□ -1.36
CCDC50-203ENST00000460064 TOR1BO14657 336 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms