RNA–Protein interactions for RNA: ENST00000459908.5

ATP11A-208, Transcript of ATPase phospholipid transporting 11A, human

TSL 2

Gene ATP11A, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP11A-208	ENST00000459908	RTN3	O95197	1032 aa	Predicted RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	NDUFA10	O95299	355 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	CD44	P16070	742 aa	Known RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	EFEMP1	Q12805	493 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	ANO4	Q32M45	955 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	KLHDC7A	Q5VTJ3	777 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	KCNT2	Q6UVM3	1135 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	CHRDL2	Q6WN34	429 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	SMG7	Q92540	1137 aa	Known RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	TGS1	Q96RS0	853 aa	Known RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	SMPD4	Q9NXE4	827 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	ZNF831	Q5JPB2	1677 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908		H3BRJ5	948 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	KRT7	P08729	469 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	VPS41	P49754	854 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	ZNF677	Q86XU0	584 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	TAB3	Q8N5C8	712 aa	Predicted RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	NUP85	Q9BW27	656 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	SP110	Q9HB58	689 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	GOLGA2P5	Q9HBQ8	144 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	PCDHA13	Q9Y5I0	950 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	ZNF197	O14709	1029 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	ADAMTS3	O15072	1205 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	SETSIP	P0DME0	302 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	COL6A1	P12109	1028 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	LRRC52	Q8N7C0	313 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	IFT81	Q8WYA0	676 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	PANX2	Q96RD6	677 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	DDIT4	Q9NX09	232 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	PPP2R2C	Q9Y2T4	447 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	CDY1	Q9Y6F8	540 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	SLC12A8	A0AV02	714 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	SPATA31D3	P0C874	917 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	BST2	Q10589	180 aa	Known RBP	11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	LPIN1	Q14693	890 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	NT5DC1	Q5TFE4	455 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	GJB7	Q6PEY0	223 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	SPATA31D4	Q6ZUB0	917 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	ATP6V0D2	Q8N8Y2	350 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	PPP1R13B	Q96KQ4	1090 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	TOX2	Q96NM4	488 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	DERA	Q9Y315	318 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	PAPPA2	Q9BXP8	1791 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908		A0A1B0GUA9	196 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	PFDN6	O15212	129 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	BAIAP3	O94812	1187 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	FBXO21	O94952	628 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.13	□□□□□ -0.63	9e-8	■■■■■ 40.5
ATP11A-208	ENST00000459908	ATG7	O95352	703 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CSH1	P0DML2	217 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CSH2	P0DML3	217 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	MCL1	Q07820	350 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CDH18	Q13634	790 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	C1orf131	Q8NDD1	294 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	SLC2A14	Q8TDB8	520 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	ZNF333	Q96JL9	665 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	IQCG	Q9H095	443 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	HYOU1	Q9Y4L1	999 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	RBM47	A0AV96	593 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	NDC80	O14777	642 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	TRIM66	O15016	1216 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CST5	P28325	142 aa	Predicted RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CDC25B	P30305	580 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	TKTL1	P51854	596 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	TPI1	P60174	286 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	DARS2	Q6PI48	645 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CEP128	Q6ZU80	1094 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	GLIS3	Q8NEA6	775 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	C18orf25	Q96B23	403 aa	Predicted RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	MUC3B	Q9H195	1237 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	FZD8	Q9H461	694 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	PPAN	Q9NQ55	473 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	ABHD10	Q9NUJ1	306 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CLDND1	Q9NY35	253 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	UTP11	Q9Y3A2	253 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	KRIT1	O00522	736 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	RTN2	O75298	545 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	PTPN1	P18031	435 aa	Known RBP	11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	GRK7	Q8WTQ7	553 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	TATDN2	Q93075	761 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	CDH9	Q9ULB4	789 aa		11.13	□□□□□ -0.63
ATP11A-208	ENST00000459908	C8orf74	Q6P047	294 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	DENND5B	Q6ZUT9	1274 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	MAATS1	Q7Z4T9	603 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	GAS2L3	Q86XJ1	694 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	LRRC8A	Q8IWT6	810 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	PLCB1	Q9NQ66	1216 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	SOWAHD	A6NJG2	315 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	EIF3CL	B5ME19	914 aa	Known RBP	11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908		M0R2N6	131 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	ZBED1	O96006	694 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	VAV2	P52735	878 aa		11.12	□□□□□ -0.63
ATP11A-208	ENST00000459908	ARHGEF18	Q6ZSZ5	1173 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms