RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 BANF1O75531 89 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 TOM1L1O75674 476 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 PTPN7P35236 360 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 RDXP35241 583 aaKnown RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 AP3M2P53677 418 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 COPS2P61201 443 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 BNIP1Q12981 228 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 PKN2Q16513 984 aaKnown RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 TFDP3Q5H9I0 405 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 DENND1BQ6P3S1 775 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 PPP1R21Q6ZMI0 780 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 CEP128Q6ZU80 1094 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 RIBC1Q8N443 379 aaPredicted RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 FITM2Q8N6M3 262 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 MAGEC3Q8TD91 643 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 ACO2Q99798 780 aaKnown RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 MRPL4Q9BYD3 311 aaKnown RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 C10orf88Q9H8K7 445 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 SSC5DA1L4H1 1573 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 BRCA1P38398 1863 aaKnown RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 CFAP73A6NFT4 308 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 FAM47DPA6NHR8 397 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 SRGAP2CP0DJJ0 459 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 MKRN3Q13064 507 aaKnown RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 GRM1Q13255 1194 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 CCDC91Q7Z6B0 441 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 ERICH1Q86X53 443 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 CHST13Q8NET6 341 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 NKD2Q969F2 451 aaPredicted RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 NOD2Q9HC29 1040 aa21.78■■□□□ 1.08
CRAT-207ENST00000458362 SAE1Q9UBE0 346 aaPredicted RBP21.78■■□□□ 1.08
CRAT-207ENST00000458362 SOWAHBA6NEL2 793 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 CDH5P33151 784 aaPredicted RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 TCF7P36402 384 aaPredicted RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 GAD2Q05329 585 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 PRKG1Q13976 671 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 PIGHQ14442 188 aaPredicted RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 MORF4L2Q15014 288 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 MTFR1Q15390 333 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 WLSQ5T9L3 541 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 FAM47EQ6ZV65 393 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 CEP57Q86XR8 500 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 ANKLE1Q8NAG6 615 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 PAIP2Q9BPZ3 127 aaKnown RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 VPS37BQ9H9H4 285 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 GOLGA8SH3BPF8 625 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 OGTO15294 1046 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 NQO1P15559 274 aaKnown RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 ASPAP45381 313 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 TFAMQ00059 246 aaKnown RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 DUOXA2Q1HG44 320 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 SGSM1Q2NKQ1 1148 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 PNMA8AQ86V59 439 aaPredicted RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 TMEM130Q8N3G9 435 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 ARFGAP1Q8N6T3 406 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 NIPA2Q8N8Q9 360 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 DENND1AQ8TEH3 1009 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 PRCCQ92733 491 aaPredicted RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 TTC25Q96NG3 672 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 DDX56Q9NY93 547 aaKnown RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 BTBD7Q9P203 1132 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 BAIAP2L1Q9UHR4 511 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 CYTH4Q9UIA0 394 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 CPSF3Q9UKF6 684 aaKnown RBP21.77■■□□□ 1.08
CRAT-207ENST00000458362 PCDHGC3Q9UN70 934 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 POLIQ9UNA4 740 aa21.77■■□□□ 1.08
CRAT-207ENST00000458362 SGK1O00141 431 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 HGSO14964 777 aaPredicted RBP21.76■■□□□ 1.07
CRAT-207ENST00000458362 ALOX15BO15296 676 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 ASMTLO95671 621 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 IFNB1P01574 187 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 ITGAVP06756 1048 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 HOXC6P09630 235 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 IBSPP21815 317 aaPredicted RBP21.76■■□□□ 1.07
CRAT-207ENST00000458362 MARK3P27448 753 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 RFC1P35251 1148 aaPredicted RBP21.76■■□□□ 1.07
CRAT-207ENST00000458362 PLCB3Q01970 1234 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 LAMTOR4Q0VGL1 99 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 TREML2Q5T2D2 321 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 ECHDC2Q86YB7 292 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 TDRPQ86YL5 185 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 ZBED8Q8IZ13 594 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 LRRC71Q8N4P6 559 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 JOSD2Q8TAC2 188 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 SLC35B2Q8TB61 432 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 TRPM4Q8TD43 1214 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 SPOCK2Q92563 424 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 ZNF518BQ9C0D4 1074 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 XYLT2Q9H1B5 865 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 TRABDQ9H4I3 376 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 GRID1Q9ULK0 1009 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 ANK1P16157 1881 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 GOLGA8MH3BSY2 632 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 IGF2BP3O00425 579 aaKnown RBP eCLIP21.76■■□□□ 1.07
CRAT-207ENST00000458362 PRKCBP05771 671 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 EFNA5P52803 228 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 DYNLT1P63172 113 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 IL9RQ01113 521 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 TRPC3Q13507 836 aa21.76■■□□□ 1.07
CRAT-207ENST00000458362 E2F5Q15329 346 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms