RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 ZNF667Q5HYK9 610 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 INTS6LQ5JSJ4 861 aaKnown RBP9.11□□□□□ -0.95
SP140-207ENST00000456542 KRT39Q6A163 491 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 RBM43Q6ZSC3 357 aaKnown RBP9.11□□□□□ -0.95
SP140-207ENST00000456542 FRMD5Q7Z6J6 570 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 FEZF2Q8TBJ5 459 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 SPPL2BQ8TCT7 592 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 KBTBD7Q8WVZ9 684 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 NECAB3Q96P71 396 aaPredicted RBP9.11□□□□□ -0.95
SP140-207ENST00000456542 TMEM209Q96SK2 561 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 DUSP9Q99956 384 aaKnown RBP9.11□□□□□ -0.95
SP140-207ENST00000456542 IMPG2Q9BZV3 1241 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 DDX43Q9NXZ2 648 aaKnown RBP9.11□□□□□ -0.95
SP140-207ENST00000456542 ARMCX3Q9UH62 379 aaPredicted RBP9.11□□□□□ -0.95
SP140-207ENST00000456542 RWDD2AQ9UIY3 292 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 NR2E1Q9Y466 385 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 YIPF1Q9Y548 306 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 CUL9Q8IWT3 2517 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 XIRP2A4UGR9 3374 aa9.11□□□□□ -0.95
SP140-207ENST00000456542 TNFRSF10AO00220 468 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 CCL16O15467 120 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
SP140-207ENST00000456542 GNA14O95837 355 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 HLA-DRAP01903 254 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 P4HA1P13674 534 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 SSTR3P32745 418 aaPredicted RBP9.1□□□□□ -0.95
SP140-207ENST00000456542 SLC39A12Q504Y0 691 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 CT47A1Q5JQC4 288 aaPredicted RBP9.1□□□□□ -0.95
SP140-207ENST00000456542 TCERG1LQ5VWI1 586 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 OTOP3Q7RTS5 596 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 LRRTM3Q86VH5 581 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 OSTM1Q86WC4 334 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 ELMOD1Q8N336 334 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 TDRD5Q8NAT2 981 aaKnown RBP9.1□□□□□ -0.95
SP140-207ENST00000456542 ATAD1Q8NBU5 361 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 FBXL13Q8NEE6 735 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 TAS1R2Q8TE23 839 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 SLC35C1Q96A29 364 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 ACSF2Q96CM8 615 aaPredicted RBP9.1□□□□□ -0.95
SP140-207ENST00000456542 FAXDC2Q96IV6 333 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 RPGRIP1Q96KN7 1286 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 PGLYRP2Q96PD5 576 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 MMS19Q96T76 1030 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 PKMYT1Q99640 499 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 ABCB6Q9NP58 842 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 CD320Q9NPF0 282 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 AVENQ9NQS1 362 aaPredicted RBP9.1□□□□□ -0.95
SP140-207ENST00000456542 NXF1Q9UBU9 619 aaKnown RBP9.1□□□□□ -0.95
SP140-207ENST00000456542 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 CDH9Q9ULB4 789 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 COQ4Q9Y3A0 265 aa9.1□□□□□ -0.95
SP140-207ENST00000456542 GREB1Q4ZG55 1949 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 DENND4CQ5VZ89 1909 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 C2CD4DB7Z1M9 353 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 PMM2O15305 246 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 N4BP1O75113 896 aaKnown RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 PTPN2P17706 415 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 ERCC5P28715 1186 aaPredicted RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 ASPAP45381 313 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 TUFMP49411 452 aaKnown RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 STX17P56962 302 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 NLRP12P59046 1061 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 NOP14P78316 857 aaKnown RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 TWF1Q12792 350 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 DUSP4Q13115 394 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 MAPRE1Q15691 268 aaKnown RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 DPCR1Q3MIW9 517 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 CFAP221Q4G0U5 840 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 CCDC40Q4G0X9 1142 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 DCAF17Q5H9S7 520 aaPredicted RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 IQCEQ6IPM2 695 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 FAM171BQ6P995 826 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 GRASPQ7Z6J2 395 aaPredicted RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 ZDHHC14Q8IZN3 488 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 LEMD2Q8NC56 503 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 CCDC150Q8NCX0 1101 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 FUBP3Q96I24 572 aaKnown RBP eCLIP9.09□□□□□ -0.95
SP140-207ENST00000456542 MED15Q96RN5 788 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 SYT15Q9BQS2 421 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 MRPL45Q9BRJ2 306 aaKnown RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 SRRTQ9BXP5 876 aaKnown RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 BCO2Q9BYV7 579 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 CRISPLD1Q9H336 500 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 SNX25Q9H3E2 840 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 FAM124BQ9H5Z6 455 aaPredicted RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 MMRN2Q9H8L6 949 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.09□□□□□ -0.95
SP140-207ENST00000456542 CEP72Q9P209 647 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 DNMT3BQ9UBC3 853 aaKnown RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 POLIQ9UNA4 740 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 ASB3Q9Y575 518 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 PCDHB5Q9Y5E4 795 aa9.09□□□□□ -0.95
SP140-207ENST00000456542 ZFP37Q9Y6Q3 630 aaPredicted RBP9.09□□□□□ -0.95
SP140-207ENST00000456542 MYH10P35580 1976 aa9.08□□□□□ -0.96
SP140-207ENST00000456542 A8MXQ7 604 aa9.08□□□□□ -0.96
SP140-207ENST00000456542 P4HA2O15460 535 aa9.08□□□□□ -0.96
SP140-207ENST00000456542 HCRTO43612 131 aa9.08□□□□□ -0.96
SP140-207ENST00000456542 MICAL2O94851 1124 aa9.08□□□□□ -0.96
SP140-207ENST00000456542 CLSTN1O94985 981 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms