RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ARHGEF35A5YM69 484 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 PROSCO94903 275 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 HARSP12081 509 aaKnown RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 GLRA2P23416 452 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 GRAPQ13588 217 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 MTMR2Q13614 643 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 PRKD1Q15139 912 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 FNBP1LQ5T0N5 605 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 ZFYVE27Q5T4F4 411 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 RNASEH2BQ5TBB1 312 aaKnown RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 C3orf62Q6ZUJ4 267 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 CENPUQ71F23 418 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 NLRX1Q86UT6 975 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 MYLK4Q86YV6 388 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 PASD1Q8IV76 773 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 SCUBE1Q8IWY4 988 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 ZFPM1Q8IX07 1006 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 RHOT1Q8IXI2 618 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 ULK2Q8IYT8 1036 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 CCDC110Q8TBZ0 833 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 GRAPLQ8TC17 118 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 ZNF526Q8TF50 670 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 POMGNT1Q8WZA1 660 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 ACSF2Q96CM8 615 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 FAM111AQ96PZ2 611 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 WDR83Q9BRX9 315 aaKnown RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 LXNQ9BS40 222 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 TMEM121Q9BTD3 319 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 C10orf88Q9H8K7 445 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 NDE1Q9NXR1 346 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 LARSQ9P2J5 1176 aaKnown RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 TBC1D30Q9Y2I9 924 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 DCAF8L1A6NGE4 600 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 DDX39AO00148 427 aaKnown RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 GAS7O60861 476 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 OPHN1O60890 802 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 FOSP01100 380 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 IL1R1P14778 569 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 PRELPP51888 382 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 ANKRD22Q5VYY1 191 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 SATL1Q86VE3 508 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 AMIGO3Q86WK7 504 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 OGFOD1Q8N543 542 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 MKL1Q969V6 931 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 NMD3Q96D46 503 aaKnown RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 UNC45AQ9H3U1 944 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 ZNF395Q9H8N7 513 aaPredicted RBP10.84□□□□□ -0.67
CLIP4-208ENST00000456385 CLIC5Q9NZA1 410 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 SLC4A7Q9Y6M7 1214 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 COMMD3-BMI1R4GMX3 469 aa10.84□□□□□ -0.67
CLIP4-208ENST00000456385 MYPNQ86TC9 1320 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 CAPN14A8MX76 684 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 F8W8V4 182 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PDLIM1O00151 329 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 TM9SF1O15321 606 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 HNRNPRO43390 633 aaKnown RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 BUD23O43709 281 aaKnown RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 LPXNO60711 386 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 MAGEC1O60732 1142 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 ACTR3P61158 418 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 USP46P62068 366 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 GTF2IP78347 998 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 MYBPC2Q14324 1141 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 MORF4L2Q15014 288 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 DLGAP5Q15398 846 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 EAPPQ56P03 285 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 C1orf146Q5VVC0 180 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 ADGRD1Q6QNK2 874 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PADI6Q6TGC4 694 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 CEP128Q6ZU80 1094 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 SDCCAG8Q86SQ7 713 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 TMPRSS6Q8IU80 811 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 SIAH1Q8IUQ4 282 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 SLF2Q8IX21 1173 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 KATNAL2Q8IYT4 538 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 ALLCQ8N6M5 410 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PYROXD1Q8WU10 500 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 NAT14Q8WUY8 206 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 SERAC1Q96JX3 654 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 C11orf70Q9BRQ4 267 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 RANBP17Q9H2T7 1088 aaKnown RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 SSU72Q9NP77 194 aaKnown RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 DNAAF2Q9NVR5 837 aaKnown RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PLA2G4CQ9UP65 541 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 WNK3Q9BYP7 1800 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PSTPIP1O43586 416 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 TM7SF2O76062 418 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 CFBP00751 764 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 YY1P25490 414 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 DSG3P32926 999 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 ETV4P43268 484 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 AP2B1P63010 937 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PLCB3Q01970 1234 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 NFIAQ12857 509 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 PTP4A2Q12974 167 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 ALCAMQ13740 583 aa10.83□□□□□ -0.68
CLIP4-208ENST00000456385 TTLL12Q14166 644 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-208ENST00000456385 SNRNP35Q16560 246 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms