RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TELO2Q9Y4R8 837 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 RREB1Q92766 1687 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SEC16AO15027 2179 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 MYO9BQ13459 2157 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TRIM43BA6NCK2 446 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM47DPA6NHR8 397 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CXorf49A8MYA2 514 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 B2RBV5 119 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 GOLGA8SH3BPF8 625 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 GOLGA8MH3BSY2 632 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 ZBTB14O43829 449 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CDH16O75309 829 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 IL18RAPO95256 599 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC12A3P55017 1021 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 GEMIN4P57678 1058 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CHRNDQ07001 517 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PPP1R18Q6NYC8 613 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 LVRNQ6Q4G3 990 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PRR23BQ6ZRT6 265 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 ULK2Q8IYT8 1036 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 ABTB1Q969K4 478 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TCP11L1Q9NUJ3 509 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 APPL1Q9UKG1 709 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TRAF3IP3Q9Y228 551 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF711Q9Y462 761 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SNED1Q8TER0 1413 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 COL18A1P39060 1754 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 LOC100653049A0A140TA62 436 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 ATP9BO43861 1147 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 AVILO75366 819 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 KRT34O76011 436 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 DHRS4L1P0CG22 281 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 LACTBP83111 547 aaPredicted RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 FMO1Q01740 532 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CDR2Q01850 454 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 UBAP2LQ14157 1087 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TFDP1Q14186 410 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SMAD1Q15797 465 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SLC2A7Q6PXP3 512 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 FRMD7Q6ZUT3 714 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TMEM110Q86TL2 294 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 USP33Q8TEY7 942 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 DYDC1Q8WWB3 177 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 CEP95Q96GE4 821 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 BTBD10Q9BSF8 475 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 LRRC19Q9H756 370 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 TRMT112Q9UI30 125 aaKnown RBP4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 DNPEPQ9ULA0 475 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PASKQ96RG2 1323 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 C1orf167Q5SNV9 1468 aa4.79□□□□□ -1.64
DEPDC1-202ENST00000456315 PHRF1Q9P1Y6 1649 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L5A8MUK1 530 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM86B1E9PN63 330 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 NRP1O14786 923 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM86B2P0C5J1 330 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 NDST2P52849 883 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 RCAN1P53805 252 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 FSTL1Q12841 308 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 PUM3Q15397 648 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 RABGAP1LQ5R372 815 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 C12orf60Q5U649 245 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 NCCRP1Q6ZVX7 275 aaPredicted RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 PIGZQ86VD9 579 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF410Q86VK4 478 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TRIM50Q86XT4 487 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 PDSS2Q86YH6 399 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 CCDC105Q8IYK2 499 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 PNPLA1Q8N8W4 532 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SMC1BQ8NDV3 1235 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 RAD54LQ92698 747 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 MAGEB18Q96M61 343 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 MAGEB5Q9BZ81 275 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 STOML1Q9UBI4 398 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SFMBT1Q9UHJ3 866 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SCOCQ9UIL1 159 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 DNAJC12Q9UKB3 198 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 GPSM3Q9Y4H4 160 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 UNCXA6NJT0 531 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 P4HA1P13674 534 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ALOX15P16050 662 aaPredicted RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 NR4A1P22736 598 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ADORA2AP29274 412 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 CABP4P57796 275 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 MRPS5P82675 430 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TMEM53Q6P2H8 277 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 NEK8Q86SG6 692 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TTC5Q8N0Z6 440 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TMTC2Q8N394 836 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 TFB1MQ8WVM0 346 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 RPGRQ92834 1020 aaKnown RBP4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 CDK5RAP3Q96JB5 506 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM161BQ96MY7 647 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 ACAP3Q96P50 834 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 SERPINB12Q96P63 405 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 CBWD1Q9BRT8 395 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 NYXQ9GZU5 481 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 BHMT2Q9H2M3 363 aa4.78□□□□□ -1.64
DEPDC1-202ENST00000456315 DMAC2Q9NW81 257 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms