RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 LHX1P48742 406 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 PSMD6Q15008 389 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 MLF2Q15773 248 aaPredicted RBP19.2■□□□□ 0.66
MSH6-207ENST00000456246 TANGO2Q6ICL3 276 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 DNAJB7Q7Z6W7 309 aaPredicted RBP19.2■□□□□ 0.66
MSH6-207ENST00000456246 ST13P5Q8NFI4 369 aaPredicted RBP19.2■□□□□ 0.66
MSH6-207ENST00000456246 SHKBP1Q8TBC3 707 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 CCDC47Q96A33 483 aaKnown RBP19.2■□□□□ 0.66
MSH6-207ENST00000456246 SLITRK6Q9H5Y7 841 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 ABCB6Q9NP58 842 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 DDX43Q9NXZ2 648 aaKnown RBP19.2■□□□□ 0.66
MSH6-207ENST00000456246 ZMYM5Q9UJ78 669 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 SIT1Q9Y3P8 196 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 PCDHB5Q9Y5E4 795 aa19.2■□□□□ 0.66
MSH6-207ENST00000456246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.19■□□□□ 0.66
MSH6-207ENST00000456246 A0A1W2PQ27 194 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 A0A1W2PQ64 194 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 A0A1W2PQD8 194 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 PI15O43692 258 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 HAPLN1P10915 354 aaPredicted RBP19.19■□□□□ 0.66
MSH6-207ENST00000456246 CDC25CP30307 473 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 MRE11P49959 708 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 CYP2J2P51589 502 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 CYP24A1Q07973 514 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 SLC44A4Q53GD3 710 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 ARHGAP15Q53QZ3 475 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 INTS6LQ5JSJ4 861 aaKnown RBP19.19■□□□□ 0.66
MSH6-207ENST00000456246 ADGRF2Q8IZF7 708 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 TTC9BQ8N6N2 239 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 DTWD2Q8NBA8 298 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 OR5B17Q8NGF7 314 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 ZSCAN18Q8TBC5 510 aaPredicted RBP19.19■□□□□ 0.66
MSH6-207ENST00000456246 FAM200AQ8TCP9 573 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 TMEM174Q8WUU8 243 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 ATOH1Q92858 354 aaPredicted RBP19.19■□□□□ 0.66
MSH6-207ENST00000456246 HPDLQ96IR7 371 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 GCNAQ96QF7 691 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 CGRRF1Q99675 332 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 OSBPL6Q9BZF3 934 aa19.19■□□□□ 0.66
MSH6-207ENST00000456246 ABI2Q9NYB9 513 aaPredicted RBP19.19■□□□□ 0.66
MSH6-207ENST00000456246 A0A1W2PRU2 124 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 KANSL1LA0AUZ9 987 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 H0Y858 1186 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 CLIC2O15247 247 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 KLRC4O43908 158 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 EXOC3O60645 756 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 KIF20AO95235 890 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 DLATP10515 647 aaKnown RBP19.18■□□□□ 0.66
MSH6-207ENST00000456246 PSMC3P17980 439 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 TNNI1P19237 187 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 TEAD2Q15562 447 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 TAF12Q16514 161 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 LMBRD2Q68DH5 695 aaPredicted RBP19.18■□□□□ 0.66
MSH6-207ENST00000456246 ALYREFQ86V81 257 aaKnown RBP19.18■□□□□ 0.66
MSH6-207ENST00000456246 LRRTM3Q86VH5 581 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 GRAMD1CQ8IYS0 662 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 PJA1Q8NG27 643 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 IRF7Q92985 503 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 CCDC34Q96HJ3 373 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 DDX23Q9BUQ8 820 aaKnown RBP19.18■□□□□ 0.66
MSH6-207ENST00000456246 TRMT61BQ9BVS5 477 aaKnown RBP19.18■□□□□ 0.66
MSH6-207ENST00000456246 BRD9Q9H8M2 597 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 TRPV5Q9NQA5 729 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 PTPRJQ12913 1337 aa19.18■□□□□ 0.66
MSH6-207ENST00000456246 GABRDO14764 452 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 GJA1P17302 382 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 ATF6P18850 670 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 GABRR2P28476 465 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 MAGEA9P43362 315 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 SNW1Q13573 536 aaKnown RBP19.17■□□□□ 0.66
MSH6-207ENST00000456246 KMT5BQ4FZB7 885 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 POTEHQ6S545 545 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 TRAPPC11Q7Z392 1133 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 SLC9A9Q8IVB4 645 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 RDH13Q8NBN7 331 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 KIAA0895Q8NCT3 520 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 FUBP3Q96I24 572 aaKnown RBP eCLIP19.17■□□□□ 0.66
MSH6-207ENST00000456246 NELL2Q99435 816 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 ATXN3LQ9H3M9 355 aa19.17■□□□□ 0.66
MSH6-207ENST00000456246 MRPS17Q9Y2R5 130 aaKnown RBP19.17■□□□□ 0.66
MSH6-207ENST00000456246 SOAT2O75908 522 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 FAM163BP0C2L3 166 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 CSH1P0DML2 217 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 CSH2P0DML3 217 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 WEE1P30291 646 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 AP3M2P53677 418 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 RPL10AP62906 217 aaKnown RBP19.16■□□□□ 0.66
MSH6-207ENST00000456246 STK4Q13043 487 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 MAPRE1Q15691 268 aaKnown RBP19.16■□□□□ 0.66
MSH6-207ENST00000456246 SOWAHAQ2M3V2 549 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 CFAP221Q4G0U5 840 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 VITQ6UXI7 678 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 GAREM2Q75VX8 874 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 LIMS2Q7Z4I7 341 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 MFSD6LQ8IWD5 586 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 CCDC127Q96BQ5 260 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 ZSWIM3Q96MP5 696 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 LPIN3Q9BQK8 851 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 PLA2G2FQ9BZM2 168 aa19.16■□□□□ 0.66
MSH6-207ENST00000456246 ZNF334Q9HCZ1 680 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms