RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ANXA9O76027 345 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ADRA2BP18089 450 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 YWHAHQ04917 246 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 DMC1Q14565 340 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 DDB1Q16531 1140 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RGS21Q2M5E4 152 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RFTN2Q52LD8 501 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 BOLA3Q53S33 107 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TTBK2Q6IQ55 1244 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 AGR3Q8TD06 166 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 IPPQ9Y573 584 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RIF1Q5UIP0 2472 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 F6X3S4 739 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RARGP13631 454 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 NCF2P19878 526 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ITGA6P23229 1130 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 POLD2P49005 469 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SCNN1DP51172 638 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ROR1Q01973 937 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 IDI1Q13907 227 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 AGAP9Q5VTM2 703 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ARHGEF16Q5VV41 709 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PEG10Q86TG7 708 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ZDHHC17Q8IUH5 632 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 C7orf57Q8NEG2 295 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 APPL2Q8NEU8 664 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PGM2Q96G03 612 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TRABDQ9H4I3 376 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 C3orf70A6NLC5 250 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 APOL1O14791 398 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ASNSP08243 561 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 UBTFL6P0CB48 400 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PEPDP12955 493 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 TYK2P29597 1187 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 FAUP35544 74 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PHKA2P46019 1235 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SCRN3Q0VDG4 424 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PEX6Q13608 980 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PDK2Q15119 407 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF667Q5HYK9 610 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 NT5DC4Q86YG4 428 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RFX6Q8HWS3 928 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 GLG1Q92896 1179 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 REPS1Q96D71 796 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 B3GALT6Q96L58 329 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 FAM167BQ9BTA0 163 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 UGT2B28Q9BY64 529 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ADNPQ9H2P0 1102 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 GPN3Q9UHW5 284 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PCDHGC5Q9Y5F6 944 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ADGRB3O60242 1522 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 MEI4A8MW99 385 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 AXIN1O15169 862 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 RALAP11233 206 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PNPLA4P41247 253 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 CRKP46108 304 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ACLYP53396 1101 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ACAP2Q15057 778 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PTPRNQ16849 979 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 IMPG1Q17R60 797 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SPDYAQ5MJ70 313 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 FAM83BQ5T0W9 1011 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 CNKSR1Q969H4 720 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SNRKQ9NRH2 765 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 LMCD1Q9NZU5 365 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PCDH10Q9P2E7 1040 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 VPS51Q9UID3 782 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PLAGL2Q9UPG8 496 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SCAF8Q9UPN6 1271 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 KIAA1024Q9UPX6 916 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SKAP2O75563 359 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 NQO1P15559 274 aaKnown RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 CHRNB3Q05901 458 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 XRCC4Q13426 336 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 NAPEPLDQ6IQ20 393 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 THEM5Q8N1Q8 247 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 SPDYE1Q8NFV5 336 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-204ENST00000455883 PRDM8Q9NQV8 689 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 EMC3Q9P0I2 261 aa5.43□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF532Q9HCE3 1301 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 DOCK8Q8NF50 2099 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 FKBP9O95302 570 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 NR3C2P08235 984 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 MAGEA10P43363 369 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-204ENST00000455883 ARMC4Q5T2S8 1044 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 FAR1Q8WVX9 515 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 SENP7Q9BQF6 1050 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 ERP44Q9BS26 406 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 NLRC4Q9NPP4 1024 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 ADGRG1Q9Y653 693 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 CACNA1SQ13698 1873 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 TULP4Q9NRJ4 1543 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 VCAM1P19320 739 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 SARSP49591 514 aaKnown RBP5.42□□□□□ -1.54
CSMD3-204ENST00000455883 DRG2P55039 364 aaKnown RBP5.42□□□□□ -1.54
CSMD3-204ENST00000455883 PSMC1P62191 440 aaKnown RBP5.42□□□□□ -1.54
CSMD3-204ENST00000455883 FBXO11Q86XK2 927 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 NME9Q86XW9 330 aa5.42□□□□□ -1.54
CSMD3-204ENST00000455883 PDCD10Q9BUL8 212 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms