RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 DLATP10515 647 aaKnown RBP22.81■■□□□ 1.24
HMGB3-205ENST00000455596 GJA1P17302 382 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 TNNI1P19237 187 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 MYL7Q01449 175 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 PFKPQ01813 784 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 CYP24A1Q07973 514 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 VEPH1Q14D04 833 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 FAM78AQ5JUQ0 283 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 TMC8Q8IU68 726 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 TOP6BLQ8N6T0 577 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 FSIP1Q8NA03 581 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 KIAA0895Q8NCT3 520 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 GOLGA5Q8TBA6 731 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 FAM200AQ8TCP9 573 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 HPDLQ96IR7 371 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 ASB16Q96NS5 453 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 CGRRF1Q99675 332 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 ACBD6Q9BR61 282 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 PLA2G2FQ9BZM2 168 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 GPR88Q9GZN0 384 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 IRF2BPLQ9H1B7 796 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 TBC1D17Q9HA65 648 aa22.81■■□□□ 1.24
HMGB3-205ENST00000455596 ABI2Q9NYB9 513 aaPredicted RBP22.81■■□□□ 1.24
HMGB3-205ENST00000455596 NRG2O14511 850 aaPredicted RBP22.8■■□□□ 1.24
HMGB3-205ENST00000455596 PI15O43692 258 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 EXOC3O60645 756 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 FGF19O95750 216 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 CDR1P51861 262 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 TEAD2Q15562 447 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 TANGO2Q6ICL3 276 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 PHLDB3Q6NSJ2 640 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 DNAJB7Q7Z6W7 309 aaPredicted RBP22.8■■□□□ 1.24
HMGB3-205ENST00000455596 ADGRF2Q8IZF7 708 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 SHKBP1Q8TBC3 707 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 CCDC47Q96A33 483 aaKnown RBP22.8■■□□□ 1.24
HMGB3-205ENST00000455596 CCDC127Q96BQ5 260 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 GDPD2Q9HCC8 539 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 PCDHB5Q9Y5E4 795 aa22.8■■□□□ 1.24
HMGB3-205ENST00000455596 PTPRDP23468 1912 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 A0A1W2PRU2 124 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 RPN1P04843 607 aaKnown RBP22.79■■□□□ 1.24
HMGB3-205ENST00000455596 HAPLN1P10915 354 aaPredicted RBP22.79■■□□□ 1.24
HMGB3-205ENST00000455596 FCARP24071 287 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 LHX1P48742 406 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 NFE2Q16621 373 aaPredicted RBP22.79■■□□□ 1.24
HMGB3-205ENST00000455596 DPH6Q7L8W6 267 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 TRAPPC11Q7Z392 1133 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 SMARCD2Q92925 531 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 SHDQ96IW2 340 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 ZSWIM3Q96MP5 696 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 LPIN3Q9BQK8 851 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 SLITRK6Q9H5Y7 841 aa22.79■■□□□ 1.24
HMGB3-205ENST00000455596 ATF6P18850 670 aa22.78■■□□□ 1.24
HMGB3-205ENST00000455596 HOXD11P31277 338 aaPredicted RBP22.78■■□□□ 1.24
HMGB3-205ENST00000455596 SNW1Q13573 536 aaKnown RBP22.78■■□□□ 1.24
HMGB3-205ENST00000455596 SOWAHAQ2M3V2 549 aa22.78■■□□□ 1.24
HMGB3-205ENST00000455596 INTS6LQ5JSJ4 861 aaKnown RBP22.78■■□□□ 1.24
HMGB3-205ENST00000455596 KRBA2Q6ZNG9 492 aa22.78■■□□□ 1.24
HMGB3-205ENST00000455596 ZSCAN18Q8TBC5 510 aaPredicted RBP22.78■■□□□ 1.24
HMGB3-205ENST00000455596 GOLPH3LQ9H4A5 285 aa22.78■■□□□ 1.24
HMGB3-205ENST00000455596 ZNF334Q9HCZ1 680 aaPredicted RBP22.78■■□□□ 1.24
HMGB3-205ENST00000455596 TMLHEQ9NVH6 421 aa22.78■■□□□ 1.24
HMGB3-205ENST00000455596 GREB1Q4ZG55 1949 aa22.78■■□□□ 1.24
HMGB3-205ENST00000455596 COL4A2P08572 1712 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 GABRDO14764 452 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 PRR29P0C7W0 189 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 ACAT1P24752 427 aaKnown RBP22.77■■□□□ 1.24
HMGB3-205ENST00000455596 PCSK1P29120 753 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 STARD6P59095 220 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 NUCB2P80303 420 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 MLF2Q15773 248 aaPredicted RBP22.77■■□□□ 1.24
HMGB3-205ENST00000455596 TAF12Q16514 161 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 SLC44A4Q53GD3 710 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 OSTM1Q86WC4 334 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 PI4K2AQ9BTU6 479 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 KCTD10Q9H3F6 313 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 ATXN3LQ9H3M9 355 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 COL4A3Q01955 1670 aa22.77■■□□□ 1.24
HMGB3-205ENST00000455596 H0Y858 1186 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 ZNF202O95125 648 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 CST3P01034 146 aaPredicted RBP22.76■■□□□ 1.23
HMGB3-205ENST00000455596 GABRR2P28476 465 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 PRKCQQ04759 706 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 GAREM2Q75VX8 874 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 SLC9A9Q8IVB4 645 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 CCDC105Q8IYK2 499 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 GIPC2Q8TF65 315 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 TRPV4Q9HBA0 871 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 DMAC2Q9NW81 257 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 SIT1Q9Y3P8 196 aa22.76■■□□□ 1.23
HMGB3-205ENST00000455596 PDXKO00764 312 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 RHOBTB3O94955 611 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 KIF20AO95235 890 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 PSMC3P17980 439 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 DPYDQ12882 1025 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 GRM2Q14416 872 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 ARHGAP15Q53QZ3 475 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 VITQ6UXI7 678 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 LIMS2Q7Z4I7 341 aa22.75■■□□□ 1.23
HMGB3-205ENST00000455596 TMEM174Q8WUU8 243 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms