RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 LRG1P02750 347 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 PCSK1P29120 753 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 ELF1P32519 619 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 PIK3CAP42336 1068 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 GCLMP48507 274 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 MXI1P50539 228 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 EPHA5P54756 1037 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 MARSP56192 900 aaKnown RBP15.18■□□□□ 0.02
HDAC4-205ENST00000454542 TNNC1P63316 161 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 TSPY1Q01534 308 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 WDR72Q3MJ13 1102 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 SLC39A12Q504Y0 691 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 KRT39Q6A163 491 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 FRMD5Q7Z6J6 570 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 FILIP1Q7Z7B0 1213 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 DCP1BQ8IZD4 617 aaKnown RBP15.18■□□□□ 0.02
HDAC4-205ENST00000454542 TDRD5Q8NAT2 981 aaKnown RBP15.18■□□□□ 0.02
HDAC4-205ENST00000454542 ATAD1Q8NBU5 361 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 SPPL2BQ8TCT7 592 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 TAS1R2Q8TE23 839 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 KHSRPQ92945 711 aaKnown RBP eCLIP15.18■□□□□ 0.02
HDAC4-205ENST00000454542 SLC35C1Q96A29 364 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 RPGRIP1Q96KN7 1286 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 MRPL45Q9BRJ2 306 aaKnown RBP15.18■□□□□ 0.02
HDAC4-205ENST00000454542 TMLHEQ9NVH6 421 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 EPS15L1Q9UBC2 864 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 DNMT3BQ9UBC3 853 aaKnown RBP15.18■□□□□ 0.02
HDAC4-205ENST00000454542 POLIQ9UNA4 740 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 TULP1O00294 542 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-205ENST00000454542 PHACTR2O75167 634 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 MBD3O95983 291 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 SSTR3P32745 418 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-205ENST00000454542 ASPAP45381 313 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 TWF1Q12792 350 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 DUSP4Q13115 394 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 PLD1Q13393 1074 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 NFE2Q16621 373 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-205ENST00000454542 CCDC142Q17RM4 750 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 ZNF667Q5HYK9 610 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 PRSS36Q5K4E3 855 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 FAM171BQ6P995 826 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 OTOP3Q7RTS5 596 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 GRASPQ7Z6J2 395 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-205ENST00000454542 MLKLQ8NB16 471 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 SYT15Q9BQS2 421 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 BCO2Q9BYV7 579 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 SDCBP2Q9H190 292 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 SMYD3Q9H7B4 428 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 PIDD1Q9HB75 910 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 APOBEC3GQ9HC16 384 aaKnown RBP15.17■□□□□ 0.02
HDAC4-205ENST00000454542 METTL14Q9HCE5 456 aaKnown RBP15.17■□□□□ 0.02
HDAC4-205ENST00000454542 ABCB6Q9NP58 842 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 CRTAC1Q9NQ79 661 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 HCFC1R1Q9NWW0 138 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 CEP72Q9P209 647 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 ARMCX3Q9UH62 379 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-205ENST00000454542 RWDD2AQ9UIY3 292 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 CDH9Q9ULB4 789 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 COQ4Q9Y3A0 265 aa15.17■□□□□ 0.02
HDAC4-205ENST00000454542 PMM2O15305 246 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 STX10O60499 249 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 RHOP08100 348 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 HAPLN1P10915 354 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-205ENST00000454542 ATF6P18850 670 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 ACAT1P24752 427 aaKnown RBP15.16■□□□□ 0.02
HDAC4-205ENST00000454542 LMO2P25791 158 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 STX17P56962 302 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 NOP14P78316 857 aaKnown RBP15.16■□□□□ 0.02
HDAC4-205ENST00000454542 NTHL1P78549 312 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 SLC5A9Q2M3M2 681 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 SGSM1Q2NKQ1 1148 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 DPCR1Q3MIW9 517 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 CFAP221Q4G0U5 840 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 CBWD6Q4V339 395 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 PABPC1LQ4VXU2 614 aaKnown RBP15.16■□□□□ 0.02
HDAC4-205ENST00000454542 CBWD3Q5JTY5 395 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 CBWD5Q5RIA9 395 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 TMC8Q8IU68 726 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 RNF135Q8IUD6 432 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 FUBP3Q96I24 572 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDAC4-205ENST00000454542 FAXDC2Q96IV6 333 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 MYADMQ96S97 322 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 LRRC3Q9BY71 257 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 OBSL1O75147 1896 aa15.16■□□□□ 0.02
HDAC4-205ENST00000454542 PATJQ8NI35 1801 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 MYBPHLA2RUH7 354 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 MICAL2O94851 1124 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 SP100P23497 879 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-205ENST00000454542 FSHRP23945 695 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 NLRP12P59046 1061 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 INCA1Q0VD86 236 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 DCAF17Q5H9S7 520 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-205ENST00000454542 SPOPLQ6IQ16 392 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 GET4Q7L5D6 327 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-205ENST00000454542 TRIM59Q8IWR1 403 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 PLCD3Q8N3E9 789 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 LEMD2Q8NC56 503 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 FBXL13Q8NEE6 735 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 SEMA4DQ92854 862 aa15.15■□□□□ 0.02
HDAC4-205ENST00000454542 ACSF2Q96CM8 615 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms