RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CHRM1P11229 460 aaPredicted RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PLCG1P19174 1290 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GUCY2CP25092 1073 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LRPAP1P30533 357 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MPLP40238 635 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TRAPPC10P48553 1259 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MCM2P49736 904 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NRLP54845 237 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NCKAP1LP55160 1127 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SEC13P55735 322 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LILRA4P59901 499 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ATP2C1P98194 919 aaPredicted RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GPR17Q13304 367 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ORC2Q13416 577 aaPredicted RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZBTB6Q15916 424 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ITPRIPL2Q3MIP1 535 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARHGAP15Q53QZ3 475 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TXNDC8Q6A555 127 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 IL31Q6EBC2 164 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 KIAA1211LQ6NV74 962 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZPBP2Q6X784 338 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DTHD1Q6ZMT9 781 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RTL10Q7L3V2 364 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 HAUS6Q7Z4H7 955 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LRRTM3Q86VH5 581 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RALGPS2Q86X27 583 aaPredicted RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GPR161Q8N6U8 529 aaKnown RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LEMD2Q8NC56 503 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 BPIFB1Q8TDL5 484 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SPIRE2Q8WWL2 714 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ERLEC1Q96DZ1 483 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CDK5RAP3Q96JB5 506 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GCNAQ96QF7 691 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SLC22A12Q96S37 553 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PI4K2AQ9BTU6 479 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MSTO1Q9BUK6 570 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EDEM2Q9BV94 578 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SLC46A2Q9BY10 475 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TPSD1Q9BZJ3 242 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RPF1Q9H9Y2 349 aaKnown RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TRPV5Q9NQA5 729 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ANGPTL2Q9UKU9 493 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TBX20Q9UMR3 447 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 UBQLN1Q9UMX0 589 aaKnown RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 WNT6Q9Y6F9 365 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DMXL2Q8TDJ6 3036 aa6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ATXN2Q99700 1313 aaKnown RBP6.49□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ANAPC1Q9H1A4 1944 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ITPR1Q14643 2758 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LNP1A1A4G5 178 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 C1QTNF9BB2RNN3 333 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CYB561D2O14569 222 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 OGTO15294 1046 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FAM13AO94988 1023 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 EPN2O95208 641 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PAPSS2O95340 614 aaPredicted RBP6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 C1QTNF9P0C862 333 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TYMPP19971 482 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SDHBP21912 280 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 BCKDHBP21953 392 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MUTP22033 750 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PMLP29590 882 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GBP1P32455 592 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NLRP12P59046 1061 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PSMC1P62191 440 aaKnown RBP6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CREB5Q02930 508 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 KCNA1Q09470 495 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MESP2Q0VG99 397 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 BFSP1Q12934 665 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FOXC1Q12948 553 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PSMD2Q13200 908 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MCM6Q14566 821 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 VEPH1Q14D04 833 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 KARSQ15046 597 aaKnown RBP6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TAF12Q16514 161 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARHGAP29Q52LW3 1261 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TMEM196Q5HYL7 178 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 STPG1Q5TH74 334 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SPATA1Q5VX52 437 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LMBRD2Q68DH5 695 aaPredicted RBP6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARMCX5Q6P1M9 558 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ARMCX6Q7L4S7 300 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 WDR5BQ86VZ2 330 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TTC30AQ86WT1 665 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CMTM8Q8IZV2 173 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MYCT1Q8N699 235 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RPLP0P6Q8NHW5 317 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NOC3LQ8WTT2 800 aaKnown RBP6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 GAB3Q8WWW8 586 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SAAL1Q96ER3 474 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FIZ1Q96SL8 496 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 IER2Q9BTL4 223 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FGFBP2Q9BYJ0 223 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RAB34Q9BZG1 259 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZCWPW1Q9H0M4 648 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TASP1Q9H6P5 420 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 C8orf33Q9H7E9 229 aaPredicted RBP6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FSCN3Q9NQT6 498 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms