RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 SMC3Q9UQE7 1217 aa25.65■■□□□ 1.7
LYSMD2-202ENST00000454181 ANKRD63C9JTQ0 380 aa25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 K7ESF4 209 aa25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 FOXD2O60548 495 aaPredicted RBP25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 PRAMEF12O95522 483 aa25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 MCM2P49736 904 aa25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 TNK2Q07912 1038 aa25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 SRSF5Q13243 272 aaKnown RBP25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 KARSQ15046 597 aaKnown RBP25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 CSRP2Q16527 193 aa25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 CNTNAP3BQ96NU0 1288 aa25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 CNTNAP3Q9BZ76 1288 aa25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 ABI2Q9NYB9 513 aaPredicted RBP25.64■■□□□ 1.7
LYSMD2-202ENST00000454181 ATF6P18850 670 aa25.63■■□□□ 1.69
LYSMD2-202ENST00000454181 AVPR1AP37288 418 aa25.63■■□□□ 1.69
LYSMD2-202ENST00000454181 ZC2HC1CQ53FD0 456 aaPredicted RBP25.63■■□□□ 1.69
LYSMD2-202ENST00000454181 LARP1BQ659C4 914 aaKnown RBP25.63■■□□□ 1.69
LYSMD2-202ENST00000454181 LARP4BQ92615 738 aaKnown RBP25.63■■□□□ 1.69
LYSMD2-202ENST00000454181 GKN1Q9NS71 199 aa25.63■■□□□ 1.69
LYSMD2-202ENST00000454181 SLC30A4O14863 429 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 HAPLN1P10915 354 aaPredicted RBP25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 BFSP1Q12934 665 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 CCINQ13939 588 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 POSTNQ15063 836 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 SV2CQ496J9 727 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 WSCD1Q658N2 575 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 PRR23CQ6ZRP0 262 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 CMTM8Q8IZV2 173 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 POMGNT1Q8WZA1 660 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 SLC46A2Q9BY10 475 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 SMG9Q9H0W8 520 aaKnown RBP25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 IL21Q9HBE4 155 aa25.62■■□□□ 1.69
LYSMD2-202ENST00000454181 KPNA7A9QM74 516 aa25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 HOXA6P31267 233 aa25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 AMPD2Q01433 879 aa25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 TSPY1Q01534 308 aa25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 POU5F1Q01860 360 aaKnown RBP25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 GRSF1Q12849 480 aaKnown RBP eCLIP25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 CC2D1AQ6P1N0 951 aaPredicted RBP25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 WDR5BQ86VZ2 330 aa25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 LRRC15Q8TF66 581 aa25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 ZNF560Q96MR9 790 aa25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 PCDHB5Q9Y5E4 795 aa25.61■■□□□ 1.69
LYSMD2-202ENST00000454181 TISP43B9A030 160 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 ATG13O75143 517 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 IL18RAPO95256 599 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 DDX6P26196 483 aaKnown RBP eCLIP25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 DDIT3P35638 169 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 C8orf34Q49A92 452 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 WDR44Q5JSH3 913 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 LRRTM3Q86VH5 581 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 NT5DC4Q86YG4 428 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 FAM160A2Q8N612 972 aaPredicted RBP25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 MAB21L3Q8N8X9 362 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 FIZ1Q96SL8 496 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 CCSER1Q9C0I3 900 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 ST6GALNAC4Q9H4F1 302 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 STYXL1Q9Y6J8 313 aa25.6■■□□□ 1.69
LYSMD2-202ENST00000454181 TPRP12270 2363 aaKnown RBP25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 PNPLA4P41247 253 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 RUNX3Q13761 415 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 NFE2Q16621 373 aaPredicted RBP25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 PPM1JQ5JR12 505 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 BRAPQ7Z569 592 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 MRPS31Q92665 395 aaKnown RBP25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 EXOC4Q96A65 974 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 HVCN1Q96D96 273 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 C2orf42Q9NWW7 574 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 MAGED2Q9UNF1 606 aaPredicted RBP25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 SLC8A2Q9UPR5 921 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 EXOC7Q9UPT5 735 aa25.59■■□□□ 1.69
LYSMD2-202ENST00000454181 PRPF40AO75400 957 aaKnown RBP25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 NLRP12P59046 1061 aa25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 GRIN1Q05586 938 aa25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 SF3A1Q15459 793 aaKnown RBP25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 DYMQ7RTS9 669 aa25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 ZNF720Q7Z2F6 126 aa25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 KIF9Q9HAQ2 790 aa25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 UPF2Q9HAU5 1272 aaKnown RBP25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 CCDC39Q9UFE4 941 aa25.58■■□□□ 1.69
LYSMD2-202ENST00000454181 EXTL3O43909 919 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 ADRB1P08588 477 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 CSH1P0DML2 217 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 CSH2P0DML3 217 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 KCNA4P22459 653 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 TFAMQ00059 246 aaKnown RBP25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 SFR1Q86XK3 245 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 DDX1Q92499 740 aaKnown RBP25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 FAM83CQ9BQN1 747 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 PI4K2AQ9BTU6 479 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 EBF3Q9H4W6 596 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 MRPL44Q9H9J2 332 aaKnown RBP25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 TDP1Q9NUW8 608 aa25.57■■□□□ 1.68
LYSMD2-202ENST00000454181 NUP210Q8TEM1 1887 aaPredicted RBP25.56■■□□□ 1.68
LYSMD2-202ENST00000454181 SOBPA7XYQ1 873 aa25.56■■□□□ 1.68
LYSMD2-202ENST00000454181 AXIN1O15169 862 aa25.56■■□□□ 1.68
LYSMD2-202ENST00000454181 F11P03951 625 aa25.56■■□□□ 1.68
LYSMD2-202ENST00000454181 AASDHQ4L235 1098 aaPredicted RBP25.56■■□□□ 1.68
LYSMD2-202ENST00000454181 IL31Q6EBC2 164 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms