RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 HCRTO43612 131 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 HUS1O60921 280 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 TNNC2P02585 160 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 SLFN14P0C7P3 912 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 GLULP15104 373 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 PFKFB1P16118 471 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 TUFMP49411 452 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 SNRNP35Q16560 246 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 TPRG1Q6ZUI0 275 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 GAREM2Q75VX8 874 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 OSTM1Q86WC4 334 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 DCP1BQ8IZD4 617 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 PAGE5Q96GU1 130 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 SPATA32Q96LK8 384 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 TRMT61BQ9BVS5 477 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 KIAA1586Q9HCI6 787 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 HEBP1Q9NRV9 189 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 GDAP2Q9NXN4 497 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 DDX43Q9NXZ2 648 aaKnown RBP17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 DLGAP2Q9P1A6 1054 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 HSFX1Q9UBD0 423 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 MTF2Q9Y483 593 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 UBE4BO95155 1302 aa17.69■□□□□ 0.42
NCKIPSD-208ENST00000454134 KANSL1LA0AUZ9 987 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 KLRC4O43908 158 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 DLATP10515 647 aaKnown RBP17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 HAPLN1P10915 354 aaPredicted RBP17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 GABRR2P28476 465 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 GDI1P31150 447 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 KRT85P78386 507 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 TSPY1Q01534 308 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 PRKCQQ04759 706 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 UBXN2BQ14CS0 331 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 VEPH1Q14D04 833 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 SURF1Q15526 300 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 CCDC142Q17RM4 750 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 DUOXA2Q1HG44 320 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 ITIH5Q86UX2 942 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 STKLD1Q8NE28 680 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 SPPL2BQ8TCT7 592 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 C2orf15Q8WU43 125 aaKnown RBP17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 CCDC127Q96BQ5 260 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 RSPRY1Q96DX4 576 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 HPDLQ96IR7 371 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 PI4K2AQ9BTU6 479 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 DDX23Q9BUQ8 820 aaKnown RBP17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 ATXN3LQ9H3M9 355 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 BRD9Q9H8M2 597 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 R3HCC1Q9Y3T6 440 aaKnown RBP17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 PCDHB5Q9Y5E4 795 aa17.68■□□□□ 0.42
NCKIPSD-208ENST00000454134 FAM170BA6NMN3 283 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 HEPACAM2A8MVW5 462 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 CMA1P23946 247 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 GPR15P49685 360 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 BMT2Q1RMZ1 405 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 SOWAHAQ2M3V2 549 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 GPR158Q5T848 1215 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 HS2ST1Q7LGA3 356 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 FRMD5Q7Z6J6 570 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 WDR49Q8IV35 697 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 ADGRF2Q8IZF7 708 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 TMEM86AQ8N2M4 240 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 XXYLT1Q8NBI6 393 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 MKNK1Q9BUB5 465 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 GPR88Q9GZN0 384 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 TRPV4Q9HBA0 871 aa17.67■□□□□ 0.42
NCKIPSD-208ENST00000454134 GFRA3O60609 400 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 PSMC3P17980 439 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 TNNI1P19237 187 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 CYP4F8P98187 520 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 MYL7Q01449 175 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 CYP24A1Q07973 514 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 SMARCB1Q12824 385 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 MYO1EQ12965 1108 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 STK4Q13043 487 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 PSMD6Q15008 389 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 TAF12Q16514 161 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 KNOP1Q1ED39 458 aaKnown RBP17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 KMT5BQ4FZB7 885 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 INTS6LQ5JSJ4 861 aaKnown RBP17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 SDHAF4Q5VUM1 108 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 TRAPPC11Q7Z392 1133 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 ARID3BQ8IVW6 561 aaPredicted RBP17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 TOP6BLQ8N6T0 577 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 ACBD6Q9BR61 282 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 IL21Q9HBE4 155 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 LTB4R2Q9NPC1 389 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 EXOC1Q9NV70 894 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 GTF3C4Q9UKN8 822 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 HPSEQ9Y251 543 aa17.66■□□□□ 0.42
NCKIPSD-208ENST00000454134 MIA3Q5JRA6 1907 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 SHISA7A6NL88 538 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 GABRDO14764 452 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 ATP2C2O75185 946 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 FGF19O95750 216 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 CST3P01034 146 aaPredicted RBP17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 CYP2F1P24903 491 aa17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 TARSP26639 723 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-208ENST00000454134 NBL1P41271 181 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms