RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 GRASPQ7Z6J2 395 aaPredicted RBP15.72■□□□□ 0.11
VPS16-205ENST00000453689 THEM5Q8N1Q8 247 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 TMEM86AQ8N2M4 240 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 AOPEPQ8N6M6 819 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 TOP6BLQ8N6T0 577 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 ANP32EQ9BTT0 268 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 ZCWPW1Q9H0M4 648 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 THAP9Q9H5L6 903 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 METTL14Q9HCE5 456 aaKnown RBP15.72■□□□□ 0.11
VPS16-205ENST00000453689 HCFC1R1Q9NWW0 138 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 MAFFQ9ULX9 164 aa15.72■□□□□ 0.11
VPS16-205ENST00000453689 NUP210Q8TEM1 1887 aaPredicted RBP15.71■□□□□ 0.11
VPS16-205ENST00000453689 ANAPC1Q9H1A4 1944 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 MTMR11A4FU01 709 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 SMTNL1A8MU46 457 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 N4BP1O75113 896 aaKnown RBP15.71■□□□□ 0.11
VPS16-205ENST00000453689 PHACTR2O75167 634 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 LRG1P02750 347 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 C4BPAP04003 597 aaKnown RBP15.71■□□□□ 0.11
VPS16-205ENST00000453689 VAMP7P51809 220 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 AP3M2P53677 418 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 MARSP56192 900 aaKnown RBP15.71■□□□□ 0.11
VPS16-205ENST00000453689 MYL6P60660 151 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 SLC39A12Q504Y0 691 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 C1orf220Q5T0J3 134 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 LIMS2Q7Z4I7 341 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 FRMD5Q7Z6J6 570 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 OSTM1Q86WC4 334 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 FAM114A1Q8IWE2 563 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 ADGRF2Q8IZF7 708 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 ZDHHC14Q8IZN3 488 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 TTC9BQ8N6N2 239 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 CNOT6LQ96LI5 555 aaKnown RBP15.71■□□□□ 0.11
VPS16-205ENST00000453689 CRISPLD1Q9H336 500 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 DNMT3BQ9UBC3 853 aaKnown RBP15.71■□□□□ 0.11
VPS16-205ENST00000453689 ARMCX3Q9UH62 379 aaPredicted RBP15.71■□□□□ 0.11
VPS16-205ENST00000453689 MUTYHQ9UIF7 546 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 BDP1A6H8Y1 2624 aa15.71■□□□□ 0.11
VPS16-205ENST00000453689 PI4K2BG5E9Z4 385 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 VNN1O95497 513 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 DUSP4Q13115 394 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 BIRC3Q13489 604 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 TRPC3Q13507 836 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 NCAPHQ15003 741 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 GET4Q7L5D6 327 aaPredicted RBP15.7■□□□□ 0.1
VPS16-205ENST00000453689 DPH6Q7L8W6 267 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 OTOP3Q7RTS5 596 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 LRRTM3Q86VH5 581 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 PLCD3Q8N3E9 789 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 ATAD1Q8NBU5 361 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 SPATA18Q8TC71 538 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 FAM200AQ8TCP9 573 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 ACSF2Q96CM8 615 aaPredicted RBP15.7■□□□□ 0.1
VPS16-205ENST00000453689 MYADMQ96S97 322 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 XYLT2Q9H1B5 865 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 EPHX3Q9H6B9 360 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 CBX8Q9HC52 389 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 DDX43Q9NXZ2 648 aaKnown RBP15.7■□□□□ 0.1
VPS16-205ENST00000453689 YIPF1Q9Y548 306 aa15.7■□□□□ 0.1
VPS16-205ENST00000453689 BECN2A8MW95 431 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 GABRDO14764 452 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 DCXO43602 365 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 HCRTO43612 131 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 STAU1O95793 577 aaKnown RBP15.69■□□□□ 0.1
VPS16-205ENST00000453689 TRIM49P0CI25 452 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 TRIM49CP0CI26 452 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 FSHRP23945 695 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 ACAT1P24752 427 aaKnown RBP15.69■□□□□ 0.1
VPS16-205ENST00000453689 ATICP31939 592 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 GBP2P32456 591 aaPredicted RBP15.69■□□□□ 0.1
VPS16-205ENST00000453689 CDR1P51861 262 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 MCCD1P59942 119 aaPredicted RBP15.69■□□□□ 0.1
VPS16-205ENST00000453689 MYL7Q01449 175 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 TWF1Q12792 350 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 IQCB1Q15051 598 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 WDR72Q3MJ13 1102 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 ZACNQ401N2 412 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 SV2AQ7L0J3 742 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 IRF2BP1Q8IU81 584 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 DHX40Q8IX18 779 aaKnown RBP15.69■□□□□ 0.1
VPS16-205ENST00000453689 DCP1BQ8IZD4 617 aaKnown RBP15.69■□□□□ 0.1
VPS16-205ENST00000453689 KBTBD7Q8WVZ9 684 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 MMS19Q96T76 1030 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 ACBD6Q9BR61 282 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 SAMSN1Q9NSI8 373 aaKnown RBP15.69■□□□□ 0.1
VPS16-205ENST00000453689 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
VPS16-205ENST00000453689 LIMD1Q9UGP4 676 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 SLC27A5Q9Y2P5 690 aa15.69■□□□□ 0.1
VPS16-205ENST00000453689 STX10O60499 249 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 RHOP08100 348 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 ALADP13716 330 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 PTPN2P17706 415 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 LHX1P48742 406 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 TNNC1P63316 161 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 TSPY1Q01534 308 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 PPP3CAQ08209 521 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 NCOA4Q13772 614 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 PABPC1LQ4VXU2 614 aaKnown RBP15.68■□□□□ 0.1
VPS16-205ENST00000453689 DCAF17Q5H9S7 520 aaPredicted RBP15.68■□□□□ 0.1
VPS16-205ENST00000453689 INTS6LQ5JSJ4 861 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms