RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 IL18RAPO95256 599 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 IL4RP24394 825 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 TBXAS1P24557 533 aaPredicted RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 KLRC2P26717 231 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 TKTP29401 623 aaKnown RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 MNX1P50219 401 aaPredicted RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 DUOXA2Q1HG44 320 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 SGSM1Q2NKQ1 1148 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 SH3PXD2AQ5TCZ1 1133 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 MMS22LQ6ZRQ5 1243 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 EXOC8Q8IYI6 725 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 KRT12Q99456 494 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 ADAM7Q9H2U9 754 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 LRRC19Q9H756 370 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 AGO3Q9H9G7 860 aaKnown RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 C1orf112Q9NSG2 853 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 SNTG2Q9NY99 539 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 AMACRQ9UHK6 382 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 DYNC1LI2O43237 492 aaPredicted RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 PROSCO94903 275 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 TFE3P19532 575 aaPredicted RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 CKAP4Q07065 602 aaKnown RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 EIF4EBP2Q13542 120 aaPredicted RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 WDR72Q3MJ13 1102 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 OLFML1Q6UWY5 402 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 PLEKHA4Q9H4M7 779 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 DERAQ9Y315 318 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 INO80B-WBP1J3KQ70 363 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 LSM8O95777 96 aaKnown RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 EIF4BP23588 611 aaKnown RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 HSPA9P38646 679 aaKnown RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 PHKA2P46019 1235 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 GYS2P54840 703 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 RNASE9P60153 205 aaKnown RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 RPS6KA1Q15418 735 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 TAF1CQ15572 869 aaPredicted RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 CFAP221Q4G0U5 840 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 PHLDB2Q86SQ0 1253 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 C12orf29Q8N999 325 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 TRIM51Q9BSJ1 452 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 INO80BQ9C086 356 aaPredicted RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 CHST7Q9NS84 486 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 EURLQ9NYK6 297 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 CNOT8Q9UFF9 292 aaKnown RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 TCEAL9Q9UHQ7 104 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 ZHX1Q9UKY1 873 aaPredicted RBP7.01□□□□□ -1.29
USP46-202ENST00000451218 F8VP50 259 aa7□□□□□ -1.29
USP46-202ENST00000451218 PGRMC1O00264 195 aaKnown RBP7□□□□□ -1.29
USP46-202ENST00000451218 GABRDO14764 452 aa7□□□□□ -1.29
USP46-202ENST00000451218 DUSP11O75319 330 aaKnown RBP7□□□□□ -1.29
USP46-202ENST00000451218 EFEMP2O95967 443 aa7□□□□□ -1.29
USP46-202ENST00000451218 FGGP02679 453 aa7□□□□□ -1.29
USP46-202ENST00000451218 PSMC4P43686 418 aa7□□□□□ -1.29
USP46-202ENST00000451218 CBX1P83916 185 aa7□□□□□ -1.29
USP46-202ENST00000451218 CBLBQ13191 982 aa7□□□□□ -1.29
USP46-202ENST00000451218 TAF5Q15542 800 aa7□□□□□ -1.29
USP46-202ENST00000451218 C9orf57Q5W0N0 161 aa7□□□□□ -1.29
USP46-202ENST00000451218 DPP9Q86TI2 863 aa7□□□□□ -1.29
USP46-202ENST00000451218 OSTM1Q86WC4 334 aa7□□□□□ -1.29
USP46-202ENST00000451218 TAF4BQ92750 862 aa7□□□□□ -1.29
USP46-202ENST00000451218 ZNF653Q96CK0 615 aa7□□□□□ -1.29
USP46-202ENST00000451218 TRAIPQ9BWF2 469 aa7□□□□□ -1.29
USP46-202ENST00000451218 GOLGA2P5Q9HBQ8 144 aa7□□□□□ -1.29
USP46-202ENST00000451218 NEU3Q9UQ49 428 aa7□□□□□ -1.29
USP46-202ENST00000451218 TNRC18O15417 2968 aaPredicted RBP7□□□□□ -1.29
USP46-202ENST00000451218 TTC3P53804 2025 aa7□□□□□ -1.29
USP46-202ENST00000451218 MICAL2O94851 1124 aa7□□□□□ -1.29
USP46-202ENST00000451218 CLSTN1O94985 981 aa7□□□□□ -1.29
USP46-202ENST00000451218 HARSP12081 509 aaKnown RBP7□□□□□ -1.29
USP46-202ENST00000451218 POLR2BP30876 1174 aaKnown RBP7□□□□□ -1.29
USP46-202ENST00000451218 TUBB4BP68371 445 aa7□□□□□ -1.29
USP46-202ENST00000451218 FSCN1Q16658 493 aaKnown RBP7□□□□□ -1.29
USP46-202ENST00000451218 FAM26DQ5JW98 314 aa7□□□□□ -1.29
USP46-202ENST00000451218 CYP4F22Q6NT55 531 aa7□□□□□ -1.29
USP46-202ENST00000451218 PEX26Q7Z412 305 aa7□□□□□ -1.29
USP46-202ENST00000451218 RTN4RL1Q86UN2 441 aaPredicted RBP7□□□□□ -1.29
USP46-202ENST00000451218 AGGF1Q8N302 714 aaeCLIP7□□□□□ -1.29
USP46-202ENST00000451218 SLC35F5Q8WV83 523 aa7□□□□□ -1.29
USP46-202ENST00000451218 SOCS4Q8WXH5 440 aa7□□□□□ -1.29
USP46-202ENST00000451218 PAAF1Q9BRP4 392 aa7□□□□□ -1.29
USP46-202ENST00000451218 PLAC1Q9HBJ0 212 aa7□□□□□ -1.29
USP46-202ENST00000451218 GDAP2Q9NXN4 497 aa7□□□□□ -1.29
USP46-202ENST00000451218 ITGA11Q9UKX5 1188 aa7□□□□□ -1.29
USP46-202ENST00000451218 USP3Q9Y6I4 520 aa7□□□□□ -1.29
USP46-202ENST00000451218 LRCH4O75427 683 aa7□□□□□ -1.29
USP46-202ENST00000451218 PAEPP09466 180 aa7□□□□□ -1.29
USP46-202ENST00000451218 CYP2B6P20813 491 aa7□□□□□ -1.29
USP46-202ENST00000451218 RPL21P46778 160 aaKnown RBP7□□□□□ -1.29
USP46-202ENST00000451218 CACNA2D1P54289 1103 aa7□□□□□ -1.29
USP46-202ENST00000451218 TFDP1Q14186 410 aa7□□□□□ -1.29
USP46-202ENST00000451218 WDR78Q5VTH9 848 aa7□□□□□ -1.29
USP46-202ENST00000451218 SLC27A1Q6PCB7 646 aa7□□□□□ -1.29
USP46-202ENST00000451218 SLC13A5Q86YT5 568 aaPredicted RBP7□□□□□ -1.29
USP46-202ENST00000451218 ZBTB8OSQ8IWT0 167 aa7□□□□□ -1.29
USP46-202ENST00000451218 KATNAL2Q8IYT4 538 aa7□□□□□ -1.29
USP46-202ENST00000451218 CTNNBL1Q8WYA6 563 aaPredicted RBP7□□□□□ -1.29
USP46-202ENST00000451218 CCDC43Q96MW1 224 aaKnown RBP7□□□□□ -1.29
USP46-202ENST00000451218 GDAP1L1Q96MZ0 367 aa7□□□□□ -1.29
USP46-202ENST00000451218 HHLA1C9JL84 531 aa7□□□□□ -1.29
USP46-202ENST00000451218 HEXIM1O94992 359 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms