RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 FCHO2Q0JRZ9 810 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 ARHGAP15Q53QZ3 475 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 BRSK2Q8IWQ3 736 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 ZBTB44Q8NCP5 570 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 TTC8Q8TAM2 541 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 NOC3LQ8WTT2 800 aaKnown RBP29.24■■■□□ 2.27
USP42-204ENST00000451154 NELL1Q92832 810 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 ZFYVE19Q96K21 471 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 CBWD1Q9BRT8 395 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 ZSCAN16Q9H4T2 348 aaPredicted RBP29.24■■■□□ 2.27
USP42-204ENST00000451154 IL21Q9HBE4 155 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 TMLHEQ9NVH6 421 aa29.24■■■□□ 2.27
USP42-204ENST00000451154 ABI2Q9NYB9 513 aaPredicted RBP29.24■■■□□ 2.27
USP42-204ENST00000451154 RBAKQ9NYW8 714 aaPredicted RBP29.24■■■□□ 2.27
USP42-204ENST00000451154 MORC2Q9Y6X9 1032 aaPredicted RBP29.24■■■□□ 2.27
USP42-204ENST00000451154 SLC38A8A6NNN8 435 aa29.23■■■□□ 2.27
USP42-204ENST00000451154 PRPF6O94906 941 aaKnown RBP29.23■■■□□ 2.27
USP42-204ENST00000451154 POLR2BP30876 1174 aaKnown RBP29.23■■■□□ 2.27
USP42-204ENST00000451154 SOX9P48436 509 aa29.23■■■□□ 2.27
USP42-204ENST00000451154 KPNA1P52294 538 aaPredicted RBP29.23■■■□□ 2.27
USP42-204ENST00000451154 TAF12Q16514 161 aa29.23■■■□□ 2.27
USP42-204ENST00000451154 DCP1BQ8IZD4 617 aaKnown RBP29.23■■■□□ 2.27
USP42-204ENST00000451154 C1orf127Q8N9H9 656 aa29.23■■■□□ 2.27
USP42-204ENST00000451154 SPPL2BQ8TCT7 592 aa29.23■■■□□ 2.27
USP42-204ENST00000451154 C2orf15Q8WU43 125 aaKnown RBP29.23■■■□□ 2.27
USP42-204ENST00000451154 CACTINQ8WUQ7 758 aaKnown RBP29.23■■■□□ 2.27
USP42-204ENST00000451154 ZNF560Q96MR9 790 aa29.23■■■□□ 2.27
USP42-204ENST00000451154 TASP1Q9H6P5 420 aa29.23■■■□□ 2.27
USP42-204ENST00000451154 LDHAP00338 332 aaKnown RBP29.22■■■□□ 2.27
USP42-204ENST00000451154 ITGB3P05106 788 aa29.22■■■□□ 2.27
USP42-204ENST00000451154 CHRNB1P11230 501 aa29.22■■■□□ 2.27
USP42-204ENST00000451154 PNPLA4P41247 253 aa29.22■■■□□ 2.27
USP42-204ENST00000451154 SMARCB1Q12824 385 aa29.22■■■□□ 2.27
USP42-204ENST00000451154 CSGALNACT2Q8N6G5 542 aa29.22■■■□□ 2.27
USP42-204ENST00000451154 BACH2Q9BYV9 841 aa29.22■■■□□ 2.27
USP42-204ENST00000451154 TFIP11Q9UBB9 837 aaKnown RBP29.22■■■□□ 2.27
USP42-204ENST00000451154 PRAMEF12O95522 483 aa29.21■■■□□ 2.27
USP42-204ENST00000451154 NASPP49321 788 aaPredicted RBP29.21■■■□□ 2.27
USP42-204ENST00000451154 MLLT6P55198 1093 aaPredicted RBP29.21■■■□□ 2.27
USP42-204ENST00000451154 STK38Q15208 465 aa29.21■■■□□ 2.27
USP42-204ENST00000451154 PDCL2Q8N4E4 241 aa29.21■■■□□ 2.27
USP42-204ENST00000451154 SLC46A2Q9BY10 475 aa29.21■■■□□ 2.27
USP42-204ENST00000451154 SMG9Q9H0W8 520 aaKnown RBP29.21■■■□□ 2.27
USP42-204ENST00000451154 PDE11AQ9HCR9 933 aa29.21■■■□□ 2.27
USP42-204ENST00000451154 PCDHB5Q9Y5E4 795 aa29.21■■■□□ 2.27
USP42-204ENST00000451154 CEP250Q9BV73 2442 aa29.21■■■□□ 2.27
USP42-204ENST00000451154 K7ELQ4 463 aaPredicted RBP29.2■■■□□ 2.26
USP42-204ENST00000451154 EXTL3O43909 919 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 LILRB5O75023 590 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 CDC25CP30307 473 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 ALCAMQ13740 583 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 CCDC65Q8IXS2 484 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 LINC00301Q8NCQ3 95 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 CXorf38Q8TB03 319 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 HPS3Q969F9 1004 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 GCNAQ96QF7 691 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 PI4K2AQ9BTU6 479 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 C8orf33Q9H7E9 229 aaPredicted RBP29.2■■■□□ 2.26
USP42-204ENST00000451154 GTSE1Q9NYZ3 720 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 L1RE1Q9UN81 338 aa29.2■■■□□ 2.26
USP42-204ENST00000451154 NUP210Q8TEM1 1887 aaPredicted RBP29.19■■■□□ 2.26
USP42-204ENST00000451154 GPR15P49685 360 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 FOXK2Q01167 660 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 TSPY1Q01534 308 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 BFSP1Q12934 665 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 ARHGAP29Q52LW3 1261 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 MAMSTRQ6ZN01 415 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 GLIS3Q8NEA6 775 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 RMDN1Q96DB5 314 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 TMEM206Q9H813 350 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 RBM12Q9NTZ6 932 aaKnown RBP29.19■■■□□ 2.26
USP42-204ENST00000451154 OBP2AQ9NY56 170 aa29.19■■■□□ 2.26
USP42-204ENST00000451154 HUS1O60921 280 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 KRT19P08727 400 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 TDGF1P13385 188 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 ACAT1P24752 427 aaKnown RBP29.18■■■□□ 2.26
USP42-204ENST00000451154 WEE1P30291 646 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 GAS6Q14393 721 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 TXNDC11Q6PKC3 985 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 STKLD1Q8NE28 680 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 BPIFB1Q8TDL5 484 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 FAM126AQ9BYI3 521 aaPredicted RBP29.18■■■□□ 2.26
USP42-204ENST00000451154 NCDNQ9UBB6 729 aa29.18■■■□□ 2.26
USP42-204ENST00000451154 ZNF638Q14966 1978 aaKnown RBP29.17■■■□□ 2.26
USP42-204ENST00000451154 SPECC1L-ADORA2AF8WAN1 911 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 SPTLC2O15270 562 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 PRPF40AO75400 957 aaKnown RBP29.17■■■□□ 2.26
USP42-204ENST00000451154 HMGA1P17096 107 aaKnown RBP29.17■■■□□ 2.26
USP42-204ENST00000451154 RBP5P82980 135 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 TNK2Q07912 1038 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 SDHAF4Q5VUM1 108 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 LMBRD2Q68DH5 695 aaPredicted RBP29.17■■■□□ 2.26
USP42-204ENST00000451154 TMEM150AQ86TG1 271 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 LRRC52Q8N7C0 313 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 ACBD6Q9BR61 282 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 DDX43Q9NXZ2 648 aaKnown RBP29.17■■■□□ 2.26
USP42-204ENST00000451154 SIX4Q9UIU6 781 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 ITGA11Q9UKX5 1188 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 SNX9Q9Y5X1 595 aa29.17■■■□□ 2.26
USP42-204ENST00000451154 DENND4CQ5VZ89 1909 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms